Gene PC1_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2748 
Symbol 
ID8133701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3116828 
End bp3117457 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content59% 
IMG OID644866036 
Producthypothetical protein 
Protein accessionYP_003018314 
Protein GI253689124 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.889964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTGGT TACTTTTCGG CGCGGGCAAT GGGGTCGGCG CCTGTTTATT AGAGCGTGCT 
ATTGAGTGCG AGCAGGCGGT CGTACTCGTC TTGCGCAATC CTGAACAGGC TAAACACTGG 
CGTGAGCAGG GGATGACGGT AGTGGAAGGC GATGCCTGCG ATCCAGAAAC GGTCGCAGAA 
GCCTGTCGTG TGGCTGGCCC TTCTGCCATT GTGGTATCGA CAATGGGCGG TGGTACGGTA 
AATTATCAGG GGCACCGGAC GGTGATCGAT GGCGCAGAGC AGGCGGGCAT CAAGCGTATG 
CTGCTGGTGA CGTCGCTGGG CTGTGGCGAT AGCTGGCCGC TGCTGTCGCC ACGCGCCAGA 
GCCGCGTTTG GCTTCGCGGT ACGTGAGAAG TCGCTGGCAG AAAGTTGGTT GCAAAGCAGT 
TCATTGGATC ATTGTATTGT GCGTCCCGGC GGTCTGCTGG ACGTGGTGGC GACGCACAAT 
GCGCAACTGA CGCAAGGCGC GGCGACGTTG GGGCTGGTGT CCCGCTGGGA TGTGGCGCTG 
GCGGTTGATC AACTGCTGCA ACAGCCTGTG TTTGGCAATC AGATCTACAA TCTGATCGAT 
CCCGATCTCA CCATGCCTGC CATTCCGTAA
 
Protein sequence
MTWLLFGAGN GVGACLLERA IECEQAVVLV LRNPEQAKHW REQGMTVVEG DACDPETVAE 
ACRVAGPSAI VVSTMGGGTV NYQGHRTVID GAEQAGIKRM LLVTSLGCGD SWPLLSPRAR 
AAFGFAVREK SLAESWLQSS SLDHCIVRPG GLLDVVATHN AQLTQGAATL GLVSRWDVAL 
AVDQLLQQPV FGNQIYNLID PDLTMPAIP