| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2674 |
|---|
| Symbol | |
|---|
| ID | 8133626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3030608 |
|---|
| End bp | 3030883 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644865961 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003018240 |
|---|
| Protein GI | 253689050 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.237229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTA GACGGCTCAA ATATTTTGTG AAAATCGTTG ATATCGGTAG CCTGACGCAG
GCTGCTGAGT TGTTGCATAT TGCACAACCG GCGCTGAGCC AGCAGGTCGC GACGCTGGAG
AGTGAACTCG AAAAACAGCT GCTGGTGCGG AGTCGGCGTG GTGTAACGCC TACCGAGGCG
GGGAAAATTC TTTATTCTCA TGCACAGACG ATATTGTCAC AGTGTGAACA GGCAAAGGAT
GCGGTGAGTG GCGCACGACA ATCAATGAGT GCGTAA
|
|---|
| Protein sequence | MNLRRLKYFV KIVDIGSLTQ AAELLHIAQP ALSQQVATLE SELEKQLLVR SRRGVTPTEA
GKILYSHAQT ILSQCEQAKD AVSGARQSMS A
|
|---|
| |