| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2672 |
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| Symbol | |
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| ID | 8133624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3028367 |
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| End bp | 3029779 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644865959 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_003018238 |
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| Protein GI | 253689048 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.164346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGAAC AATCAAAAGA AACCGCAGAT CTCGCCCCTG AACAAGGCGA AGGACTGCAA
CGGAATCTGA CTAATCGTCA TATTCAGCTC ATCGCCATCG GCGGAGCGAT CGGTACTGGG
CTATTCATGG GCTCGGGCAA AACAATCAGC ATGGCTGGCC CTTCGATCAT CTTCGTTTAT
ATGATCATTG GCTTTATGCT GTTTTTCGTC ATGCGCGCAA TGGGAGAGCT ATTACTTTCC
AATCTCAACT ATAAATCATT TAGTGACTTC GCGGCCGACC TGCTTGGGCC ATGGGCAGGC
TTCTTTACCG GCTGGACTTA CTGGTTCTGC TGGGTTGTCA CCGGGATAGC CGATGTCGTA
GCCATCAGCG CCTACTCTCA GTTCTGGTTC CCTGATTTAT CGCAGTGGGT CTCTTCTCTG
CTTTGCGTTC TGCTTCTACT TACGCTAAAT CTGGCAACCG TGAAGCTGTT TGGCGAAATG
GAATTCTGGT TCGCCATGAT AAAAATTGTC GCTATCGTTG CGTTAATCGC AGTCGGCGCC
GTGTTGGTGA TGATGCAATT CTCTTCCCCA TCAGGCAATG TCGCCTCCTT TACCAACCTC
TGGAATGATG GCGGCATGTT CCCTAAAGGA ATCAGTGGGT TCTTCGCCGG GTTCCAGATC
GCCGTATTCG CCTTTGTCGG CATCGAACTG GTGGGTACAA CTGCTGCTGA AACGAAAAAC
CCGAAAGTCG TACTGCCTCG CGCGATTAAC GCCATTCCGA TTCGCATCAT CATGTTCTAT
GTTTTTGCGC TAATCATGAT TATGTCCGTC ACGCCTTGGG GTGCGATCAC AGCGGATCGG
AGTCCTTTTG TGGAAATGTT CGTACTTGTC GGCTTACCTG CGGCTGCCAG TATGATCAAC
TTCGTCGTCC TGACGTCTGC GGCATCCTCA GCAAATAGCG GCGTCTTCTC CACCAGCCGT
ATGCTCTTTA GTCTGGCTAA ACAAGGCGAT GCACCGAAAA GCTTCGGCAT GCTTTCTAAG
CGCGCCGTTC CTTCGACTGG ACTGATGTTT TCCTGTATTT GTTTGCTTTC CGGCGTAGTA
TTAATCTACC TGATTCCGAA CGTGATGACC GTCTTTACGT TAGTGACCAC CGTCTCCGCT
ATTTTATTCA TGTTCATCTG GAGCATCATC CTGTGCTCTT ACCTGACCTA TCGTAAAAAG
CGCCCTCAGC TACATACCGA GTCATCCTAT AAAATGCCAT TGGGTATTTT CATGTGCTGG
GTATGTCTGG CCTTTTTCGC TTTTGTTATT GTACTGTTAA CATTACAACC AGATACGCGG
CAGGCGCTGA TTGTCACGCC GCTGTGGTTT ATTGTTCTGG CTATTGCTTA TCAGTTTATT
CGTCGGAAAA AGCAGACTAT TGACGTGAAG TAA
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| Protein sequence | MVEQSKETAD LAPEQGEGLQ RNLTNRHIQL IAIGGAIGTG LFMGSGKTIS MAGPSIIFVY
MIIGFMLFFV MRAMGELLLS NLNYKSFSDF AADLLGPWAG FFTGWTYWFC WVVTGIADVV
AISAYSQFWF PDLSQWVSSL LCVLLLLTLN LATVKLFGEM EFWFAMIKIV AIVALIAVGA
VLVMMQFSSP SGNVASFTNL WNDGGMFPKG ISGFFAGFQI AVFAFVGIEL VGTTAAETKN
PKVVLPRAIN AIPIRIIMFY VFALIMIMSV TPWGAITADR SPFVEMFVLV GLPAAASMIN
FVVLTSAASS ANSGVFSTSR MLFSLAKQGD APKSFGMLSK RAVPSTGLMF SCICLLSGVV
LIYLIPNVMT VFTLVTTVSA ILFMFIWSII LCSYLTYRKK RPQLHTESSY KMPLGIFMCW
VCLAFFAFVI VLLTLQPDTR QALIVTPLWF IVLAIAYQFI RRKKQTIDVK
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