Gene PC1_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2626 
Symbol 
ID8133574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2992389 
End bp2992802 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID644865909 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003018192 
Protein GI253689002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0239529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTT CGAAAGAGGA ATTTTTATTC CTTATTGGTG GGCGTTTGCG CGAAGAGCGG 
GAAACGATTG GTAAAAGTCA GAGTGCAATT GCAGAAGAGT TAGGCACGAC AACAAGGACT 
TGGGGAAAAT ACGAGCGTGG CGAAACTGCC CCCGATGGTG CAACGCTAGC TTTTCTTAGT 
GAAAATTACG GCATGGATAC TTTGTATATC CTCACCGGAA AAAGAACCCC CGACCTTGGT 
GACATTTCTA ATGATGAATT GGAGCTCGTC AAAATCTATC GTGCTGCGCC ACTGGCGATA 
AAAGCTGCCG CTTTAGCCGC GTTGACGGCG GGCAGTTCTG CGACAGCATC GATAAACGTA 
ACGGGTAGCG GCCAGCGCGT AGCGGGCAGA GACTATCACG AAGGTAAAAA ATAA
 
Protein sequence
MSTSKEEFLF LIGGRLREER ETIGKSQSAI AEELGTTTRT WGKYERGETA PDGATLAFLS 
ENYGMDTLYI LTGKRTPDLG DISNDELELV KIYRAAPLAI KAAALAALTA GSSATASINV 
TGSGQRVAGR DYHEGKK