Gene PC1_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2616 
Symbol 
ID8133564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2982784 
End bp2983716 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content42% 
IMG OID644865899 
Producthypothetical protein 
Protein accessionYP_003018182 
Protein GI253688992 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0513326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAAGC ACACGCATTT TTTTTCTGAT AAAAAAATTG TTTTTTTTGT CGCCACATTA 
TGCTGTTTGC TCTGGGGAAG TGCTTATCCG GCAATTAAAA ATGGTTATGA ACTGTTTCAC
ATTGCAGATA ATGATATTCC TGGAAAACTC GTTTTTGCAG GCTACCGGTT CGCCTTCGCC
GGGCTGTTGC TGTTAGTGCT GGCTGTGTTA AGCGGGCGGT CTATCGGGCG TTTTCAGCGT
GGGCAGTTAG TCCAGTTGAG CATCCTGGGA ATATTCCAGA CATCATTGCA GTATGTTTTT
TTCTATATCG GTCTGGCTTA TACCACAGGC GTTAAAGGCT CGATCATGAA TGCAACCAGT
ACTTTTTTTA GCGTGCTGCT TGCTCATTAT TTGTACCAGA ATGATAAATT AAATATCAAC
AAGCTAGTGG GTTGTATATT AGGCTTTGTC GGTGTGATGG TCGTTAATAT CAACAGTAAC
GGCATGAGCA CCAGTTTTAC GTTGTTAGGT GATGGGTTCG TTGTTATTGC CGCATTTATT
TTGTCTGCAT CTACTATATA TGGTAAGCGG ATATCGCAAA CCATGGATCC AACTGTAATG
ACAGGTTATC AATTGGCTAT TGGTGGGATC ATTTTAACGA TATCGGGGTA CTGTACAGGT
GGAACACTCA TCATACCTGA TTGGAAAGCT GTGCTGATGC TGGGCTATCT TATTTTGCTC
TCTTCTGTCG CTTTTTCATT ATGGAGCCAA TTGCTGAAAT ATAATCGAGT TGGTATGGTC
GCACCATTTA ATTTCCTCAT CCCGGTATCT GGTACGCTGC TTTCAGCGCT GTTCCTTAAT
GAAAGCATCC TAGAGTGGAA ATATTTCTTT GCACTTGTCT TGGTTTGTTC AGGTATTTGG
TTGGTTAACC GAGTGGTGAA AAGCGCTCGC TAA
 
Protein sequence
MEKHTHFFSD KKIVFFVATL CCLLWGSAYP AIKNGYELFH IADNDIPGKL VFAGYRFAFA 
GLLLLVLAVL SGRSIGRFQR GQLVQLSILG IFQTSLQYVF FYIGLAYTTG VKGSIMNATS
TFFSVLLAHY LYQNDKLNIN KLVGCILGFV GVMVVNINSN GMSTSFTLLG DGFVVIAAFI
LSASTIYGKR ISQTMDPTVM TGYQLAIGGI ILTISGYCTG GTLIIPDWKA VLMLGYLILL
SSVAFSLWSQ LLKYNRVGMV APFNFLIPVS GTLLSALFLN ESILEWKYFF ALVLVCSGIW
LVNRVVKSAR