Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2612 |
Symbol | |
ID | 8133560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2978970 |
End bp | 2980022 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644865895 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003018178 |
Protein GI | 253688988 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.119507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATC AGCATCCCAT TATTCGCAAA AAGCGTAAGT CTGGACATGG GGGCCACCAT GGTGGCTCCT GGAAGATTGC CTACGCTGAC TTCATGACAG CAATGATGGC ATTGTTTCTT GTAATGTGGC TTATCGCAAT TTCTACGCCA ATGCAGCTGG CCCAAATCGC AGAGTATTTT CGAACTCCAC TAAAGGTTGC GCTAACGTCA GGCTCTAAAT CAAGCGACAG TTCCAGCCCG ATCCCGGGCG GAGGAAACGA TCCAACCCAG CAAGATGGTG AAGTGAAAAA GGCCATCAAA ACAGATAACG TGGAAAAGAA GCTGGATGAG GTTCGACTCA ACAGATTGCG TGAGCGTCTG GATCAGTTAA TTGAAGCCGA TCCACGGCTG CGCGCACTTC GTCCACACCT GTTAATTGAA ATGATCGATG AAGGGTTACG TATCCAAATC ATTGATAGTC AAAACCGCCC AATGTTTAAA ACCGGAAGCG CGCAGGTTGA ACCTTATATG CGAGATATTC TGCGTGCTAT AGCGCCTATT CTGAACGATT TCCCCAATAA ACTGAGTATT TCAGGCCATA CCGATGATGT TCAGTATACG ACGGGGGAAC GTGGTTATAG TAACTGGGAA CTGTCCGCAG ATCGTGCCAA TGCATCGCGC CGAGAGCTTA TTTTTGGTGG TTTGTCTGAT GGAAAAGTTT TGCGCGTTGT GGGCATGGCT GCGACAATGA ACCTCAAACA GGCGACAGGT GGAAATGATG CGATTAACCG ACGCATCAGT CTGCTGGTAT TGAGCAGACA AGCTCAAAAG GATATTGAAG AAGAAAATGC AGAAAGCTCT GCTGTAAATA TAGACAAGGC GGAAAATTTA CAAAATATGG AGTTGGATAA GCCTAAACCT AACACTCCGG CTGCCGAAAA TAGTGATAAT AATACGAGTG GGAGTGGTGG GGCATCGCCA CAACCAACTA ATGGAGTTCC TGCTCCAGAG CGTCAACAGC CAACCACCGC GTTGCCTGCT GCGCCCGATA GTCAGGCGAC GCCTTCTCAA TAA
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Protein sequence | MKHQHPIIRK KRKSGHGGHH GGSWKIAYAD FMTAMMALFL VMWLIAISTP MQLAQIAEYF RTPLKVALTS GSKSSDSSSP IPGGGNDPTQ QDGEVKKAIK TDNVEKKLDE VRLNRLRERL DQLIEADPRL RALRPHLLIE MIDEGLRIQI IDSQNRPMFK TGSAQVEPYM RDILRAIAPI LNDFPNKLSI SGHTDDVQYT TGERGYSNWE LSADRANASR RELIFGGLSD GKVLRVVGMA ATMNLKQATG GNDAINRRIS LLVLSRQAQK DIEEENAESS AVNIDKAENL QNMELDKPKP NTPAAENSDN NTSGSGGASP QPTNGVPAPE RQQPTTALPA APDSQATPSQ
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