Gene PC1_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2604 
SymbolflhB 
ID8133552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2969653 
End bp2970804 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content47% 
IMG OID644865887 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_003018170 
Protein GI253688980 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGATG ATAGCGATCT AGAAAAAACA GAAGCCCCCA CTCCCCAAAA GGAGGAAAAG 
GCGCGTGAAG AAGGCCAGAT CCCACGATCT CGAGAGCTGA CTTCTGTTCT GATGATGGTC
GCAGGATTGG CTATTTTGTG GATAGGTGGC GATGCTATGG CTGGCCGATT GGCCAGAATT
GTCTCACAGT CGTTAAATTT TGATTACGCC ACGATCGGCG ATGACACCCA AATGCTACGG
CATGTTGGCT CATTACTGCG TCAGGCTGCG TCGGCGTTAA TACCCATTAT GTTCGGGGCT
GTGTTGGTTG CACTGTCTGC GCCTTTGCTG CTCGGCGGGG TACTATTTAG TACCAAATCA
TTAAAAGTTA ATTTTAAAAA ATTAGATCCT ATCTCTGGAC TGAAGCGGTT GTTTTCTGCT
CAATCACTAG CTGAGCTTTT TAAAGCAATA TTAAAATCAG TCATGGTTGG GATCATTAGT
ACGCTGTTCT TGATTCATAA CTGGCCAAAA ATATTGCATT TAATATCCGA ATCGCCGATT
TCGGCGTTAG GTGATGCGTT AGAGTTGGCC GTAATGTGTG GCTTTCTCAT CATCATGGGC
CTGATTCCTA TGGTCGCTTT TGATGTGTTT TGGCAAGTCT GGAGCCACAT CAAAAAATTA
CGGATGAGCA AGCAGGAAAT TCGGGACGAG CATAAACAGA GTGAAGGCGA TCCTCATGTT
AAAGGCCGTA TTCGTCAGCA GCAGAGAGCA ATTGCTCAGC GTAGAATGAT GGCTGATGTA
CCTAAGGCTG ATGTGATAGT CACTAACCCG ACGCATTATG CGGTAGCATT ACGTTATGAT
GAGAAAAAAA TGAATGCGCC GAAAGTGTTG GCTAAAGGTG CGGGTGAGAT CGCTTTACGC
ATTCGTGAGT TGGGAACCGA GCATCGCGTC CCTATTTTAG AAGCGCCCCC GTTGGCTCGA
GCGCTATTTC GTCATTCAGA GATCGGAGAG CACATTCCCG CTGCGTTGTA TGCGGCTGTT
GCAGAAGTCT TAGCTTGGGT TTATCAACTG AAACGCTGGA AGCGCGAAGG TGGATTAATT
CCTAGAAAAC CGAAACATTT ACCAGTGCCT GATGCGCTGG ATTTTGCTAA AGAGAATACT
ACTGATGGCT AA
 
Protein sequence
MADDSDLEKT EAPTPQKEEK AREEGQIPRS RELTSVLMMV AGLAILWIGG DAMAGRLARI 
VSQSLNFDYA TIGDDTQMLR HVGSLLRQAA SALIPIMFGA VLVALSAPLL LGGVLFSTKS
LKVNFKKLDP ISGLKRLFSA QSLAELFKAI LKSVMVGIIS TLFLIHNWPK ILHLISESPI
SALGDALELA VMCGFLIIMG LIPMVAFDVF WQVWSHIKKL RMSKQEIRDE HKQSEGDPHV
KGRIRQQQRA IAQRRMMADV PKADVIVTNP THYAVALRYD EKKMNAPKVL AKGAGEIALR
IRELGTEHRV PILEAPPLAR ALFRHSEIGE HIPAALYAAV AEVLAWVYQL KRWKREGGLI
PRKPKHLPVP DALDFAKENT TDG