| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2588 |
|---|
| Symbol | flgL |
|---|
| ID | 8133536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2955167 |
|---|
| End bp | 2956120 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644865872 |
|---|
| Product | flagellar hook-associated protein FlgL |
|---|
| Protein accession | YP_003018155 |
|---|
| Protein GI | 253688965 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTAA GTACCAGCAT GATGTACCAG CAAAATATGC AAGGCATTAT TAATGGTCAG
GCAACGTGGC AAAAAACGGG TGAGCAGTTA TCAACCGGTA AACGCGTCGT AAATCCATCA
GACGATCCGA TTGCGGCGGC GAGCGCCATT ATGCTTGGCC AGGCTCAATC AGAAAACAGT
CAGTATACGT TGGCGCGTAC GTTTGCTAAG CAAAGTATGT CTTTAGAAGA ATCTATTCTT
AATAAGAGCT CGACCACGAT TACCAGCGCA TTGACTGAAG TCATCAAAGG CGGCGGTGTT
TTGAATGACG ACGACCGTAA ATCGGTCGCG ACTTCTCTGC GCGGTATGAA GGCTGAATTG
TTAAATATGG CTAACAGTAC CGATGGTAAT GGTAACTATA TTTTTTCTGG TTATGAAACC
GATAATCCTC CTTTTGTTGA CGGTGCGACG GGAATTCAGT ACGTCGGCGG AAATCAGGCC
ATTTCACAGC GTGTTGATTC CGCTCGAAAT ATGACAGTCG GCCATACTGG CTCTGCGGTT
TTCAATGGTG TAACTGGTGA TGCCAAAAAA GAACCGGATG GGAGTATCCA GTCGGACTTA
TTTGAAACGC TAGACATTGC AATTAAAGCG CTTGAAACCC CACTTGCGGA TGCTGATGAT
GTAACAAAAG CCAATGTTGC TGCAGCGTTA GAAACGGCAA ACCGTGGTTT AAACAATTCA
CTTAATAACA TCTCATCCGT TCGGGCCGAA TTGGGTATTC AGCTCAATGA GATTGATAAT
CTCGATGCGG TTGGTAAAGA TCGTGATGTA GCGAATAAAA CGACATTGTC GCAGTTGCAG
GACACCGACT GGTATGAAGC GATCTCGTCT TATATCATGC AGCAGTCTTC TCTGCAGGCT
TCTTATACGG CTTTCCAGAA CATGCAGGGT ATGTCGTTAT TCCAGATGAA ATAG
|
|---|
| Protein sequence | MRLSTSMMYQ QNMQGIINGQ ATWQKTGEQL STGKRVVNPS DDPIAAASAI MLGQAQSENS
QYTLARTFAK QSMSLEESIL NKSSTTITSA LTEVIKGGGV LNDDDRKSVA TSLRGMKAEL
LNMANSTDGN GNYIFSGYET DNPPFVDGAT GIQYVGGNQA ISQRVDSARN MTVGHTGSAV
FNGVTGDAKK EPDGSIQSDL FETLDIAIKA LETPLADADD VTKANVAAAL ETANRGLNNS
LNNISSVRAE LGIQLNEIDN LDAVGKDRDV ANKTTLSQLQ DTDWYEAISS YIMQQSSLQA
SYTAFQNMQG MSLFQMK
|
|---|
| |