Gene PC1_2583 details

Gene Information

• Locus tag: PC1_2583
• Symbol: fliN
• ID: 8133531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 2952148
• End bp: 2952561
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644865867
• Product: flagellar motor switch protein FliN
• Protein accession: YP_003018150
• Protein GI: 253688960
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGACA CCAAGAAACC GTCCGACGAC AAGGAATCAG TGGACGATCT GTGGGCTGAT 
GCATTTAACG AGCAACAGGC TGCAGAAAAA CCGGCCGCGA CAACCGAAGG CATTTTCAAA 
TCGCTGGAAG GTCATGATCC GCTGGGTGCC TTACAGGATA TCGATCTTAT TCTGGATATT 
CCTGTCAAAC TCACCGTTGA GCTTGGCCGG ACAAAAATGA CGATAAAAGA GCTTCTGCGT 
CTCACCCAAG GTTCTGTTGT CGCACTTGAT GGCTTGGCTG GTGAACCGCT GGATATCCTG 
ATCAATGGTT ATCTCATCGC TCAGGGTGAA GTTGTCGTCG TATCTGACAA GTATGGTGTG 
CGTATTACCG ACATCATCAC ACCATCCGAA CGTATGCGCC GCCTGAGTCG TTAA 

 

Protein sequence

MSDTKKPSDD KESVDDLWAD AFNEQQAAEK PAATTEGIFK SLEGHDPLGA LQDIDLILDI 
PVKLTVELGR TKMTIKELLR LTQGSVVALD GLAGEPLDIL INGYLIAQGE VVVVSDKYGV 
RITDIITPSE RMRRLSR