Gene PC1_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2570 
Symbol 
ID8133518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2939736 
End bp2940602 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content50% 
IMG OID644865854 
Productflagellin domain protein 
Protein accessionYP_003018137 
Protein GI253688947 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTA TTAATACTAA CATCATGTCT CTGACTACTC AGAACAACCT GAACAAATCT 
CAGTCTGCTC TGGGTACCGC TATCGAGCGT CTGTCTTCTG GTCTGCGTAT CAACAGCGCG
AAAGATGACG CAGCTGGCCA AGCGATCGCT AACCGTATGA CCGCTCAGAT TAAGGGTATG
ACCCAGGCTG CTCGTAACGC CAACGATGGT ATCTCTCTGA CTCAAACTGC CGAAGGCAAC
CTGAACGAAA TCAACAACAA CTTGCAGCGT ATCCGTGAGC TGGCAACCCA AGCAGCGAAC
GATCCTAACG GCAAGACTGA CCGTGATTCT ATCGTTAAGG AAATGACCCA GCGTATTAAC
GAAGTTAACC GTGTTGCGCA GAGTGCTTCT TTCAACGGCA CCAAACTGCT GGACGGTTCT
GCAAGTGCTG GTATCATCAT TCAGGTTGGT GCTAACACTG GCTCAACTGA AACCATCACT
ATCGACAGCA CTGCGTTGAT CAACGCAACG ACTGGCGGTT CAATGAGTGA TGTTTCTGAT
AAAATTACTT CTCTGGGTGC TGTTGCTACT GGCAGTTCTG CTAACGCCGC CGCTCAGGCA
CTGATCACCT CTCTGGATAC TGCACTGTCT GCTGTCGACA CTGCTCGTAG TAACCTGGGT
GCGATTCAGA ACCGTTTCTC ATCTACCATT ACTAACCTGA ACAACTCTAT TAACAACCTG
TCTTCTGCTC GTAGCCGTAT CGAAGACGCT GACTACGCGA CCGAAGTATC AAACATGAGC
CGTAGCCAGA TTCTGCAGCA GGCTGGTACT TCTGTACTGT CTCAGGCAAA CCAGGTTCCA
CAGACTGTTC TGTCTCTGCT GCGTTAA
 
Protein sequence
MAVINTNIMS LTTQNNLNKS QSALGTAIER LSSGLRINSA KDDAAGQAIA NRMTAQIKGM 
TQAARNANDG ISLTQTAEGN LNEINNNLQR IRELATQAAN DPNGKTDRDS IVKEMTQRIN
EVNRVAQSAS FNGTKLLDGS ASAGIIIQVG ANTGSTETIT IDSTALINAT TGGSMSDVSD
KITSLGAVAT GSSANAAAQA LITSLDTALS AVDTARSNLG AIQNRFSSTI TNLNNSINNL
SSARSRIEDA DYATEVSNMS RSQILQQAGT SVLSQANQVP QTVLSLLR