Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2547 |
Symbol | |
ID | 8133494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2911810 |
End bp | 2912430 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644865830 |
Product | regulator of competence-specific genes |
Protein accession | YP_003018114 |
Protein GI | 253688924 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000620558 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAT TATGCAAAAA AAGGATTTTG CAATCTCAGC ATTCTTTTTC ATCTTTGGGG GACATCACTT CACGTTCCCA ATTTGGTGGC TACAGCATCG CAGCAAATAA AACGATTTTT GGACTGGTCT CGGAAGGGGA GCTTTATCTG CGTGCCAGTA AGAAAGATGA AAGATATTTT CAGCAGCGCG ATATGCCTCA TCTGATTTAT ACCAAACGTG GAATGCCGTT ACCGCTGAAC TACTTCCTTG TCGATGAAGC ATTATGGCAA GAACCGCAAA CGCTATTATA TTTTGCCCGA CTAGCGTTGG CTGGTGCGCA GCATGATCAG GTCCTCAAAT GTACGAGCGG GCGTTTAAAA GATCTCCCGA ATCTTAACCA CGATATTGAA CGACTACTGT GGAAAGCGGG GATAAGGAAT GTTGATGAAT TACAGCATTA TGGCGCTAAA AATAGCTATC TCGAGTTGAG GAAGGTTCGC GCTAATCTGA GTGTTAACGT GCTGTTGGCG CTTGCTGGCG CCATCTGTGG CACGCACCAA GCGGCACTCC CTCGCGGTAT CCGCAACGAA CTGCTGGAGT GGTATAAAAA TAATGCTGTC TCTAAAGGAT CAAAGCACTA A
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Protein sequence | MKQLCKKRIL QSQHSFSSLG DITSRSQFGG YSIAANKTIF GLVSEGELYL RASKKDERYF QQRDMPHLIY TKRGMPLPLN YFLVDEALWQ EPQTLLYFAR LALAGAQHDQ VLKCTSGRLK DLPNLNHDIE RLLWKAGIRN VDELQHYGAK NSYLELRKVR ANLSVNVLLA LAGAICGTHQ AALPRGIRNE LLEWYKNNAV SKGSKH
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