Gene PC1_2537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2537 
Symbol 
ID8133484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2903103 
End bp2903762 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content52% 
IMG OID644865820 
Producthypothetical protein 
Protein accessionYP_003018104 
Protein GI253688914 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0345189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGTA TTGTTGTTTC TTCTACCCGT GAAAGCTCGC TACTCAGCAC GCACAAAGTG 
CTGCGCAACA CCTATTTCCT GCTGTCGCTG ACGCTGGGTT TTTCCGCCGT TACCGCAACA 
GCAAGTACCG TACTTAACCT GCCCGCTCCG GGATTAATTC TGATGCTGGT TGGGTTTTAT 
GGCCTGATGT TCCTGACGCA CAAACTGGCG AACAGCCCTG CGGGTATTCT GGCAGCGTTC 
GCACTGACCG GATTTATGGG TTATACGCTG GGCCCGATTT TAAGTTCGCT GATTTCCTCC 
GGCGCTGGCG ACATTGTCAT GCTGGCGCTG GGCGGCACGG CACTGGTGTT CTTTTGCTGT 
TCAGCTTACG TCTTAACGAC ACGTAAAGAT ATGTCCTTCC TGTCAGGTAT GATGATGGCA 
GGATTTGTTG TTCTGGTTGT CGCCGTCATC GCCAATCTGT TCTTGCAGAT TCCGGCCTTG 
CATCTGGCGA TCAGTGCCCT GTTTATTCTG TTCTCTGCGG GTGCCATCCT GTGGGAAACC 
AGTAACATCA TCCACGGTGG CGAGACCAAC TACATCCGAG CAACGGTTAG CCTGTATGTC 
GCGATCTACA ATATCTTCGT TAGCCTGTTG AGCATTCTGG GCATCATGCG TAACGACTAA
 
Protein sequence
MDRIVVSSTR ESSLLSTHKV LRNTYFLLSL TLGFSAVTAT ASTVLNLPAP GLILMLVGFY 
GLMFLTHKLA NSPAGILAAF ALTGFMGYTL GPILSSLISS GAGDIVMLAL GGTALVFFCC 
SAYVLTTRKD MSFLSGMMMA GFVVLVVAVI ANLFLQIPAL HLAISALFIL FSAGAILWET 
SNIIHGGETN YIRATVSLYV AIYNIFVSLL SILGIMRND