Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2532 |
Symbol | |
ID | 8133478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2899538 |
End bp | 2899966 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644865814 |
Product | UspA domain protein |
Protein accession | YP_003018099 |
Protein GI | 253688909 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACGA GCATCCTAGT GCCAGTAGAT ATAGAAGAAG ATGAACTCAC CCAACACGCG ATTACGCATG CAGTTAGGTT GGCTAAAATG TCAGGCGCCG CAATACACCT CTTCCATTCC CTCCCGGATG CATCGGCGTT CTTATCTGCG TATTCTTTTG GCATAAAAGA GTTTGAGAAT GAGGCGGTGG TGAAAGCAAA TGACAAGCTC AAATCGCTGA TGAAAACGAT CGATCTGCCG GCGTCGCGGT TGTCATGCAG CGTCAGTTTT GGTTCGGCCA GAGACGAGGT GCTGGCGCTG GCGGAGGAGA TGAATGCGGA TTTGATCGTC ATCGGTTCGC GGCGGCCAGA TGTGAAAACC TACCTGCTTG GCTCAAATGC CGCAGCCATC GTTCGCCATG CGAAAATGTC CGTATTAGTT GTCCGTTAG
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Protein sequence | MYTSILVPVD IEEDELTQHA ITHAVRLAKM SGAAIHLFHS LPDASAFLSA YSFGIKEFEN EAVVKANDKL KSLMKTIDLP ASRLSCSVSF GSARDEVLAL AEEMNADLIV IGSRRPDVKT YLLGSNAAAI VRHAKMSVLV VR
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