| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2513 |
|---|
| Symbol | |
|---|
| ID | 8133459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 2881028 |
|---|
| End bp | 2882071 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644865795 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_003018080 |
|---|
| Protein GI | 253688890 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0418] Dihydroorotase |
|---|
| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.983589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC AGCCCACTAT TCTTAAAATC CGTCGTCCTG ACGATTGGCA CATTCACCTG
CGTGACGATC GGATGCTGGA AACCGTTCTC CCCTATACCA GCCGTTTCTT TGGCCGTGCG
ATTGTTATGC CTAACCTGAC GCCGCCGATT ACCACCGTGG CCAGCGCTAT CGCGTATCGC
CAACGTATTT TAGCCGCGGT TCCGCAGGGT GATGACTTTC ACCCGCTTAT GACGTGCTAC
CTGACCGATG CGCTCGATGC CAATGAAATC GTGAGTGGTT TTGAGCAAGG TGTCTTTACT
GCTGCCAAAT TATACCCGGC CAACGCCACA ACAAACTCCA GCCATGGGGT AACCAGCGTC
GCCAATATCT CCGGCATTTT GGAGAAAATG CAAAAAATTG GCATGCCGTT ACTCATCCAC
GGTGAAGTTA CCGACGCTGC CGTGGATATT TTCGATCGGG AAGCCCGCTT CATCGAAACG
GTATTGGAAC CATTGCGCCA ACAATTCCCT GAGCTGAAGG TCGTCCTCGA GCACATTACG
ACGAAAGAAG CCGCGCAGTA CGTGGTTGAA GGTAATGATT ATCTCGCCGC AACCATTACT
CCGCAGCACC TGATGTTTAA CCGCAATCAT ATGCTGGTTG GCGGCGTTCG CCCTCACCTG
TATTGCCTGC CGATCTTAAA ACGTAATACG CATCAGCAGG CGCTACGTGA AGCCGTAGCC
AGCGGTTGTG AACGCCTTTT CCTCGGTACT GATTCAGCGC CTCACGCGAA ACACAGGAAA
GAATCCAGCT GTGGCTGTGC TGGAGTATTC AATGCCCAGG CGGCATTAAG CACATACGCC
ACCGTTTTTG AAGAAATGAA CGCGCTTGAT AAACTCGAAG CATTCTGCTC CCTGAACGGC
CCACGTTTTT ATGGCCTGCC AGTGAACGAC AGCTGGATTG AGCTTTACCG TGAAACGGTC
ACGTTCCCGG AAGAAATCTC GCTTGGCGAT GAGTCGTTAA TCCCCTTCCT TGCCGGACAA
AGCCTCAACT GGTCAGTCCG TTAA
|
|---|
| Protein sequence | MTAQPTILKI RRPDDWHIHL RDDRMLETVL PYTSRFFGRA IVMPNLTPPI TTVASAIAYR
QRILAAVPQG DDFHPLMTCY LTDALDANEI VSGFEQGVFT AAKLYPANAT TNSSHGVTSV
ANISGILEKM QKIGMPLLIH GEVTDAAVDI FDREARFIET VLEPLRQQFP ELKVVLEHIT
TKEAAQYVVE GNDYLAATIT PQHLMFNRNH MLVGGVRPHL YCLPILKRNT HQQALREAVA
SGCERLFLGT DSAPHAKHRK ESSCGCAGVF NAQAALSTYA TVFEEMNALD KLEAFCSLNG
PRFYGLPVND SWIELYRETV TFPEEISLGD ESLIPFLAGQ SLNWSVR
|
|---|
| |