Gene PC1_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2508 
Symbol 
ID8133454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2874276 
End bp2874797 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID644865790 
Producthypothetical protein 
Protein accessionYP_003018075 
Protein GI253688885 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.57627e-05 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGG TAAAATTACC CTTAACCCTT GATGCGGTCC GCACTGCTCA GAAGCGTTTA 
GACTACGTTG GTATCTATTC GCCAGAACAA GTAGAGCGTG TTGCCGAATC AGTGGTGAGT
GTGGATAGTG ATGTTCAGGC CTCTTTATCT TTCAATATTG ATAATCAGCG TCTGGCAGTG
ATTGACGGTA ACGCCGATGT TACGGTCACA CTGATGTGTC AACGTTGCGG AAAGCCGTTT
GAGCATCAAG TCCATGCGAC ATTCTGTTTT AGCCCGGTCG TCAATGATGA GCAGGCCGAA
GCGTTACCGG AAGCGTATGA GCCGATCGGC GTTGATGAGT TTGGCGAAGT CGATCTGCTG
GCAATGATTG AAGATGAAAT TATTCTGATG TTGCCTATCG CCCCGGTGCA TGATTCTGAA
CACTGTGAAG TGTCCGAAGC GGACATGGTG TTTGGCCAAC TGCCTGAAGA GGCGGAAAAA
CCAAATCCGT TTGCCGTATT AGCAAGTTTA AAGCGTAAGT AA
 
Protein sequence
MQKVKLPLTL DAVRTAQKRL DYVGIYSPEQ VERVAESVVS VDSDVQASLS FNIDNQRLAV 
IDGNADVTVT LMCQRCGKPF EHQVHATFCF SPVVNDEQAE ALPEAYEPIG VDEFGEVDLL
AMIEDEIILM LPIAPVHDSE HCEVSEADMV FGQLPEEAEK PNPFAVLASL KRK