Gene PC1_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2506 
Symbol 
ID8133452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2873013 
End bp2874059 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content51% 
IMG OID644865788 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_003018073 
Protein GI253688883 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000749199 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACACGCC TAACTCTGGC GTTAGATGCG ATGGGCGGGG ATTTTGGTCC CTGCGTAACA 
GTGCCTGCTG CATTGCAGGC ACTGGCTTCT AATCCAGCTC TCAATTTGTT ATTAGTCGGC 
GATCCTGCTG CGATTACACC ATTACTTGCC AAAGTCGATT CTGATTTACT TTCCCGCTTA 
GAAGTTGTTC CGGCGGAGTC GGTTATTGCT AGTGATGCGA GGCCGTCGCA GGCTATTCGT 
GCGAGCCGTG GTACCTCAAT GCGCATAGCG CTTGAGTTGA TTAAAGACGG CAGAGCACAG 
GCCTGTGTGA GTGCAGGCAA CACGGGTGCG CTCATGGGGC TGGCTAAGCT TCTGATTAAG 
CCACTTGAAG GTATTGAACG ACCCGCATTG GTGTCGGTCT TACCTCACCA GCAGCACGGA 
AAGACCGTCG TGTTGGATCT GGGAGCGAAT GTTGACTGTG ATAGCACAAT GCTGGTTCAG 
TTTGCCGTGA TGGGTTCAGT CATGGCGGAA GAAGTGCTGG AACTGAAGAA CCCTCGGGTC 
GCGTTGTTGA ATATTGGTGA AGAAGAAAGC AAAGGACTGA GCACTATCCG TGAAGCAGCG 
GCACAGTTAA AAGAGGCACC ATCAATAAAT TATATCGGTT ATCTGGAAGG CAACGATCTG 
CTGACTGGGA AAACGGATGT GATGGTCTGT GACGGCTTTG TGGGTAATGT CACACTGAAA 
ACGGTGGAAG GCGTGGTAAG GATGTTTCTG TCACTGCTGA AATCGCCAGC CTCAGGCCCG 
GGGCAAAAAC AAAAACGGTC CTGGTGGTTG AAATGGCTGG GACGTTTGTT ACAAAAGCGC 
TTATCAAAGC GTTTCGGTCA TTTGAACCCC GATCAATATA ATGGCGCATG CCTGCTAGGA 
TTACGGGGAA CTGTAATCAA AAGCCATGGT GCAGCAAACC AGAGAGCGTT TGCGGTTGCT 
ATTGAACAGG CAATGCAGAC GGTACGGCGG CAGCTTCCCG ACCGGATTGC CGCCCGTCTA 
GAAGCGGTAT TACCCAAGAG TGACTAA
 
Protein sequence
MTRLTLALDA MGGDFGPCVT VPAALQALAS NPALNLLLVG DPAAITPLLA KVDSDLLSRL 
EVVPAESVIA SDARPSQAIR ASRGTSMRIA LELIKDGRAQ ACVSAGNTGA LMGLAKLLIK 
PLEGIERPAL VSVLPHQQHG KTVVLDLGAN VDCDSTMLVQ FAVMGSVMAE EVLELKNPRV 
ALLNIGEEES KGLSTIREAA AQLKEAPSIN YIGYLEGNDL LTGKTDVMVC DGFVGNVTLK 
TVEGVVRMFL SLLKSPASGP GQKQKRSWWL KWLGRLLQKR LSKRFGHLNP DQYNGACLLG 
LRGTVIKSHG AANQRAFAVA IEQAMQTVRR QLPDRIAARL EAVLPKSD