| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2505 |
|---|
| Symbol | |
|---|
| ID | 8133451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2872053 |
|---|
| End bp | 2873006 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644865787 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_003018072 |
|---|
| Protein GI | 253688882 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000055762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATACAA AAATAATCGG AACGGGCAGC TACCTGCCTG AACAAATCAG GACGAACGCT
GATTTAGAAA AGATGGTGGA AACGACGGAC GAATGGATCG TCACACGTAC TGGAATCCGT
GAGCGCCGAA TTGCTGCGCC GGATGAGAAC GTTGCGACCA TGGGATACCG TGCCGCGCAG
AAAGCGCTGG AAATGGCAAA TGTCGATCCT TCTGAAGTCG GTCTTCTGAT TGTTGCGACA
ACATCATCAA GCCATGCTTT CCCGAGCTCT GCCTGTCAGG TTCAGCAGTT GTTAGGGATC
AAAGATACGA TCGCTTTCGA TCTGGCGGCT GCCTGTGCAG GTTTTACCTA TGCGCTGAGC
GTTGCCGATC AATATGTTAA AAATGGTGCG GTGAAATACG CACTGGTAAT TGGTTCCGAT
ACGCTGTCTC GTACATTGGA TCCTGAAGAT CGCGGCACGC TGATTTTATT CGGTGATGGA
GCGGGGGCGG TGCTGTTAAC GCCATCAGAG CAGCCGGGTA TTCTTTCTAC CCATCTGCAC
GCTGATGGGC GCTATGGTGA ACTGCTGGCG CTGCCGCATC AGGATCGTAA CCATGCGGAG
ACGCCTGCTT ACCTGACGAT GGCGGGTAAT GAAGTCTTTA AAGTGGCCGT GACTGAACTG
GCACATATCG TTGAAGAAAC GCTGCAAGCG GCTCAACTGG ACAAAAGTGA ATTAGACTGG
TTGGTGCCTC ATCAGGCTAA CCTGCGAATC ATTAGCGCCA CGGCGAAAAA GCTGGGTATG
GGGATGGACA AGGTGGTTGT GACGTTGGAT CGTCATGGTA ATACCTCCGC GGCTTCCGTG
CCTTCAGCGC TTGATGAAGC CGTGCGCGAT GGGCGCATTA AACCAGGGCA ACTGGTGCTG
CTTGAAGCCT TCGGCGGCGG TTTTACCTGG GGTTCCGCGC TGGTTCGTTT TTAA
|
|---|
| Protein sequence | MYTKIIGTGS YLPEQIRTNA DLEKMVETTD EWIVTRTGIR ERRIAAPDEN VATMGYRAAQ
KALEMANVDP SEVGLLIVAT TSSSHAFPSS ACQVQQLLGI KDTIAFDLAA ACAGFTYALS
VADQYVKNGA VKYALVIGSD TLSRTLDPED RGTLILFGDG AGAVLLTPSE QPGILSTHLH
ADGRYGELLA LPHQDRNHAE TPAYLTMAGN EVFKVAVTEL AHIVEETLQA AQLDKSELDW
LVPHQANLRI ISATAKKLGM GMDKVVVTLD RHGNTSAASV PSALDEAVRD GRIKPGQLVL
LEAFGGGFTW GSALVRF
|
|---|
| |