Gene PC1_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2498 
Symboltmk 
ID8133444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2866035 
End bp2866694 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID644865780 
Productthymidylate kinase 
Protein accessionYP_003018065 
Protein GI253688875 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00108643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTA AATTTATCGT CATTGAAGGG TTGGAAGGCG CAGGGAAGAC CACCGCGCGT 
CATATCGTGG TGGAAACACT GCGGTCACAT GGCGTGAAAG AGGTGGTTTT CACGAGAGAA 
CCCGGTGGCA CGCCGCTGGC AGAGAAGCTA CGTGAGCTTA TCAAGCAAGG TATGACCGAT 
GAGAAGGTCA CCGATAAAGC GGAAGTCCTA ATGCTGTATG CCGCCAGAGT TCAACTGGTT 
GATAATGTTA TCAAACCCGC TTTGGCTAAC GGGCAATGGG TTATCGGCGA TCGTCACGAT 
CTTTCTTCAC AGGCTTATCA GGGTGGTGGA CGTGGGATCG ATCAGCAACT GCTGCGTTCA 
CTACGCGATA CCGTGCTGGG CGATTTTCGC CCTGACCTGA CGCTCTATCT GGATTTGCCG 
CCAGCTATCG GTTTGCAGCG CGCGCGCGCG CGCGGCGAAC TGGATCGGAT TGAGCAGGAA 
TCGCTGGCTT TCTTTGAGCG CACTCGCTCC CGTTATCAGG AGTTGGCAGC GGAGGATGAC 
AGCATCCTGA CGATCGATGC TTCACAATCG ATTGAGGCCG TTAGTGCGGA TATTCAGGCA 
GCGCTACAGC AGTGGTTGCA GCAACAAGGG TTGCTAGCTG TCGTGCAGGA GCCGCGCTGA
 
Protein sequence
MNSKFIVIEG LEGAGKTTAR HIVVETLRSH GVKEVVFTRE PGGTPLAEKL RELIKQGMTD 
EKVTDKAEVL MLYAARVQLV DNVIKPALAN GQWVIGDRHD LSSQAYQGGG RGIDQQLLRS 
LRDTVLGDFR PDLTLYLDLP PAIGLQRARA RGELDRIEQE SLAFFERTRS RYQELAAEDD 
SILTIDASQS IEAVSADIQA ALQQWLQQQG LLAVVQEPR