Gene PC1_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2494 
Symbol 
ID8133440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2861603 
End bp2862400 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID644865776 
Producthelix-turn-helix domain protein 
Protein accessionYP_003018061 
Protein GI253688871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.106258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACAT TGGAAAGAAC TCGCCATGAT CTGGCTGCAT TTTTGCGCGC GCGCCGTGAA 
CGGGTGTCGC CCGCCGACGT GGGCTTGCCT AGCGGAGGAA GACGGCGCAC GCCGGGGTTA 
AGACGCGAAG AAGTGGCGGC ATTAGCTGGC GTTGGCCTGA CGTGGTACAC CTGGCTCGAA 
CAGGGACGCG ATATCGGTGT GTCGGCAGCA TTTCTGGACA GCCTGGCACG GGTGCTAAAA 
CTCGATGCCG CTGAACGTCG CCATCTGTTC CTGCTGGCGC ATGAGCGACC GCCGGCCGAA 
CCGGGTAAGA CATGGTGCGT CGTGCCACCG CTGGTACGGC GTCTAATGCA CGATCTGGCT 
CCGCATCCGG CCTATATCCT CAACCTGCGC TGGGATGTGT TGACCTTCAA TGAACCGGCA 
AATCAGCTTT TCAGCTTCGA TGCCCATCCT TCCGAAAGAC GTAATCTGCT CTGGCTCTTG 
TTCACCGACC CGTTACTGCA TGAGCGATTC ATCGGCTGGG AGCAACAGGC TCCGCAGATG 
CTGTCGAGTT TTCGCCGCGA TTTCGCACGT GCGACGCAGG AAGCAGACAT TCATGAACTG 
GTGGACGAAC TGGAGCGGGT ATCGCCAGAT TTCAAAACGT GGTGGCGGCA GCATGAGGTA 
CACGCCCCAT GTAGCGGCGT GCGGCAACTG ATGATCGACG GCAAGGCTGA AGTTTTCGAA 
CATACTTCGC TAACCATCGA TGAAGATCGC CATCTGCGTC TGGTGGTTTA CGCCCGTCAG 
TCTCAGAAAG AGGAATAA
 
Protein sequence
MRTLERTRHD LAAFLRARRE RVSPADVGLP SGGRRRTPGL RREEVAALAG VGLTWYTWLE 
QGRDIGVSAA FLDSLARVLK LDAAERRHLF LLAHERPPAE PGKTWCVVPP LVRRLMHDLA 
PHPAYILNLR WDVLTFNEPA NQLFSFDAHP SERRNLLWLL FTDPLLHERF IGWEQQAPQM 
LSSFRRDFAR ATQEADIHEL VDELERVSPD FKTWWRQHEV HAPCSGVRQL MIDGKAEVFE 
HTSLTIDEDR HLRLVVYARQ SQKEE