Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2463 |
Symbol | |
ID | 8133409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2828152 |
End bp | 2829603 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865745 |
Product | hypothetical protein |
Protein accession | YP_003018030 |
Protein GI | 253688840 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.560083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAGA CACCGTTATT CAAAAATCAC TATTTTCACC AACTGCCGGA GTTCTATACC GCGCTACAGC CCAAACCGCT ACATGGCGCG CGCTTGCTTT ACCATAGCGA GGGGTTGGCC GCCGAACTCG GTTTGTCTTC TGACTGGTTT ACGCCAGAAC AGGATGCTGT TTGGAGCGGC GAGCGTTTGT TGCCGGGAAT GGAGCCGCTG GCGCAGGTGT ATAGCGGCCA TCAGTTTGGC ATGTGGGCCG GCCAATTGGG TGACGGGCGC GGCATCCTGC TGGGAGAACA ACAGCTGGCA GATGGTCGCA GCATGGACTG GCACCTGAAA GGCGCAGGGC TGACGCCGTA TTCGCGCATG GGGGACGGTC GTGCCGTGCT GCGCTCGGTG ATACGCGAAT TTCTGGCCTC GGAAGCGATG CACCATTTGG GGATCCCCAC TACGCGGGCG TTGACGATTG TCACCAGCAC GCATCCGGTA CAGCGTGAGC AGGAAGAAAA GGGCGCCATG CTGATGCGCG TAGCGGAAAG CCATGTGCGT TTCGGCCATT TTGAACACTT CTACTATCGC CGTGAGCCGG AAAAGGTGCG TCAACTGGTG GAGTATGTCA TTGCCCGCCA CTGGCCGCAG TGGGAAAACG ATGAGCGTCG CTATGAGCTG TGGTTTGGCG ATGTGGTAGA ACGTACCGCC CGTCTGATTA CGCACTGGCA GGCGGTGGGG TTTTCACACG GCGTGATGAA TACGGATAAT ATGTCGATTC TGGGGCTGAC CATCGACTAC GGTCCTTATG GCTTTTTAGA TGCCTATCAA CCCAACTTTA TTTGTAACCA CTCCGATCAT CGCGGGCGCT ATGCGTTTGA TAATCAGCCT GCGGTGGGGC TGTGGAATCT ACATCGTCTG GCGCAGGCGC TGTCGGGGTT GATGGATACC GACACGCTGG AGCGCGCGCT TGCCCGCTAT GAACCGGCGT TGATGCAGCA TTATGGCACG CTGATGCGCG CCAAGTTGGG CTTGTTTACC GCGAGCGCGG AAGATAATGA CGTACTGGTC GGGCTGTTAC GTCTGATGCA GCAGGAAGGC AGCGACTACA CCCACACGTT CCGTTTGCTG GCAGACAGTG AAAAGCAGGC ATCGCGGGCG CCGCTCCGTG ATGAGTTTAT CGACAGAGCA GCGTTCGATA GCTGGTTTGC GACCTATCGC CAAAGACTGA TGCAGGAAGA GCAAGGTGAT GAAGAGCGAC GTCGGTTGAT GAATACGACG AACCCGAAAT TTATTCTGCG TAATTATCTG GCGCAAATGG CGATCGAACG GGCTGAAAAC GATGATATCA GCGTACTGGC ACGTCTGCAT CAAGCTCTGT GTCAGCCGTT TGACGAACAG CCGGATAAGA ACGATCTGGC GGCGTTACCA CCAGAGTGGG GCAAACATCT GGAGATTTCC TGCTCCAGCT GA
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Protein sequence | MQQTPLFKNH YFHQLPEFYT ALQPKPLHGA RLLYHSEGLA AELGLSSDWF TPEQDAVWSG ERLLPGMEPL AQVYSGHQFG MWAGQLGDGR GILLGEQQLA DGRSMDWHLK GAGLTPYSRM GDGRAVLRSV IREFLASEAM HHLGIPTTRA LTIVTSTHPV QREQEEKGAM LMRVAESHVR FGHFEHFYYR REPEKVRQLV EYVIARHWPQ WENDERRYEL WFGDVVERTA RLITHWQAVG FSHGVMNTDN MSILGLTIDY GPYGFLDAYQ PNFICNHSDH RGRYAFDNQP AVGLWNLHRL AQALSGLMDT DTLERALARY EPALMQHYGT LMRAKLGLFT ASAEDNDVLV GLLRLMQQEG SDYTHTFRLL ADSEKQASRA PLRDEFIDRA AFDSWFATYR QRLMQEEQGD EERRRLMNTT NPKFILRNYL AQMAIERAEN DDISVLARLH QALCQPFDEQ PDKNDLAALP PEWGKHLEIS CSS
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