Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2456 |
Symbol | |
ID | 8133402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2819516 |
End bp | 2821894 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865738 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_003018023 |
Protein GI | 253688833 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATA ACGGCCCTGA TTTGCGTAAT GTCCTTTGGT ATAACCAGCT CGGTATGCAC GACGTTGAAA GGGTGGGGGG CAAAAATGCC TCTCTGGGTG AAATGATCAC CAACCTTTCA GGATTGGGCG TAGCCGTTCC CAACGGCTTT GCGACAACGG CGCAGGCGTT TAATGATTTT CTTAATCAAA GCGGGATTAA CCAGCGCATT TATGAGCTGC TCGATCGCAC CGACATTGAC GACCTGAATC AACTGGCCAG CGCGGGTACG CAGATTCGCC AGTGGATTAT TGATACGCCA TTCCAGCCGG AGCTGGAGAA GGCGATCAGC GACGCCTATC AGCAACTGGC CGATGGCGAG AAAGACGCCT CGTTTGCTGT GCGTTCTTCC GCCACCGCGG AAGATATGCC GGATGCGTCT TTTGCCGGCC AACAGGAAAC CTTCCTGAAT GTGCAGGGTA TTGATGCTGT GATGGTCGCG GTGAAGCACG TGTTTGCGTC GTTGTTTAAT GACCGCGCGA TCTCCTACCG TGTGCATCAG GGCTACGACC ATCGCGGTGT GGCGCTGTCG GCGGGCGTGC AGCGCATGGT GCGTTCCGAT CTGGCTTCCG CGGGTGTGAT GTTTACCATT GATACCGAAT CCGGTTTTGA TCAGGTGGTG TTTATCACGT CGGCTTACGG TTTGGGTGAA ATGGTGGTGC AGGGCGCGGT GAACCCGGAC GAGTTCTATG TCCACAAGCC GACCTTGCAG AACAACAAAC CTGCGATTGT GCGCCGTAAC ATGGGATCGA AAAAAATCCG TATGGTGTAT GCCGCGAGTC AGGAACATGG CAAGCAGGTG CGGATTGAAG ATGTGCCGGC AGAGCAAACG ACGCGTTTCA GCCTGACGGA CGACGAAGTG CAGGCGCTGG CGCGTCAGGC ACTGCTGATT GAAAAACATT ATGGCCGCCC GATGGACATC GAGTGGGCGA AAGATGGTCA CACCGGTAAG CTCTACATCG TGCAGGCGCG CCCGGAAACG GTGCGTTCCA ACGGTCAGGT GATGGAGCGT TACCACCTGC CAGCCAGCGG CACGGTGCTG GTGGAAGGCC GTGCGATCGG TCACCGCATC GGTGCGGGTG AAGTCAAAGT GATTCAGGAC ATCAGCGAGA TGCACCTGAT CAACGCAGGC GATGTACTGG TTACCGACAT GACCGATCCG GACTGGGAAC CGATCATGAA GAAGGCGGCA GCGATTGTGA CCAATCGCGG CGGACGTACC TGCCATGCGG CGATTATCGC GCGTGAGCTG GGCATTCCAG CCGTTGTGGG CTGCGGCGAT GCGACCGAGC GTTTGCGCAA AGGGCAAAAA GTCACCGTTT CTTGTGCGGA AGGCGACACG GGCTATGTGT ATCAGGATCT GCTGGATTTC TCCGTGAAGA GTTCACAGAT TGATGAAATG CCAGCTCTGC CGCTGAAAAT CATGATGAAC GTGGGTAACC CTGACCGCGC ATTTGATTTT GCCTGCCTGC CAAACGATGG CGTCGGTCTG GCGCGTCTGG AATTCATTAT CAACCGCATG ATTGGCGTGC ACCCGCGTGC GTTGCTGGAA TTCGACCAGC AAACCCCTGA GTTGCAACGT GAGATCAAGA CGCTGATGCA GGGCTTCGAC GATCCGATCG AGTTCTACGT CGGTCGTCTG ACTGAAGGGA TCGCGACGCT GGCAGCCGCA TTCTCGCCGA AGCGCGTTAT TGTCCGCCTG TCCGATTTTA AATCCAACGA GTACGCCAAT CTGGTCGGTG GCGAGCGTTA TGAGCCGGAA GAAGAGAACC CGATGCTGGG CTTCCGCGGT GCGGGTCGTT ACGTGTCGCC GGACTTCAAA GCCTGTTTCG CGCTGGAATG TGAAGCGGTT AAACGCGTGC GTAATGTGAT GGGTCTGAAG AACGTGGAAA TCATGATCCC GTTTGTTCGT ACCGTGGCGC AAGCGGAAGC GGTGATTGCA GAACTGGCGA ATCAGGGGCT GCGTCGTGGC GAAGATGGCC TGAAAATCAT CATGATGTGC GAGATTCCGT CCAACGCGCT GCTGGCCGAC GAATTCCTGC AACACTTTGA TGGTTTCTCC ATCGGCTCAA ATGACATGAC GCAGCTGGCG CTGGGTCTGG ATCGTGACTC CGGCGTGGTA TCGTCGCTGT TTGATGAGCG TAACGATGCG GTGAAAGCGT TGCTGTCGAT GGCGATCAAG GCCGCTAAGA AGCAGGGTAA ATACGTCGGT ATTTGCGGAC AGGGTCCGTC AGATCACGAA GATTTCGCCC TCTGGCTGAT GGAACAAGGC ATCGATAGCC TGTCGCTCAA CCCGGACACC GTGGTGCAAA CCTGGCTGAA TCTGGCTGAG CACAAGTAA
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Protein sequence | MSNNGPDLRN VLWYNQLGMH DVERVGGKNA SLGEMITNLS GLGVAVPNGF ATTAQAFNDF LNQSGINQRI YELLDRTDID DLNQLASAGT QIRQWIIDTP FQPELEKAIS DAYQQLADGE KDASFAVRSS ATAEDMPDAS FAGQQETFLN VQGIDAVMVA VKHVFASLFN DRAISYRVHQ GYDHRGVALS AGVQRMVRSD LASAGVMFTI DTESGFDQVV FITSAYGLGE MVVQGAVNPD EFYVHKPTLQ NNKPAIVRRN MGSKKIRMVY AASQEHGKQV RIEDVPAEQT TRFSLTDDEV QALARQALLI EKHYGRPMDI EWAKDGHTGK LYIVQARPET VRSNGQVMER YHLPASGTVL VEGRAIGHRI GAGEVKVIQD ISEMHLINAG DVLVTDMTDP DWEPIMKKAA AIVTNRGGRT CHAAIIAREL GIPAVVGCGD ATERLRKGQK VTVSCAEGDT GYVYQDLLDF SVKSSQIDEM PALPLKIMMN VGNPDRAFDF ACLPNDGVGL ARLEFIINRM IGVHPRALLE FDQQTPELQR EIKTLMQGFD DPIEFYVGRL TEGIATLAAA FSPKRVIVRL SDFKSNEYAN LVGGERYEPE EENPMLGFRG AGRYVSPDFK ACFALECEAV KRVRNVMGLK NVEIMIPFVR TVAQAEAVIA ELANQGLRRG EDGLKIIMMC EIPSNALLAD EFLQHFDGFS IGSNDMTQLA LGLDRDSGVV SSLFDERNDA VKALLSMAIK AAKKQGKYVG ICGQGPSDHE DFALWLMEQG IDSLSLNPDT VVQTWLNLAE HK
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