| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2446 |
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| Symbol | |
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| ID | 8133392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2806624 |
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| End bp | 2807847 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865728 |
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| Product | bifunctional cysteine desulfurase/selenocysteine lyase |
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| Protein accession | YP_003018013 |
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| Protein GI | 253688823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0854402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATC CTATTGAACG GGTTCGCGCC GATTTTCCGT TGCTGGCAAG CGAGGTTAAC
GGTCAGCCGT TAGCCTATCT TGATAGCGCC GCGAGTGCGC AAAAGCCGCA GTCGGTTATC
GAACGTGAAG CCGAATTCTA TCGTCATGAA TATGCTGCGG TGCACCGCGG CATTCACACG
CTGAGCGCAC AGGCGACTAG CGCGATGGAA GCGGTTCGTG AGCAGGTGGC TGCTTTTATC
AATGCAGCCT CAGTGGAAGA GATTGTCTTT GTTCGCGGGA CGACGGAGGC CATCAATCTG
GTGGCTAACA GCTATGGCCG CACATTCATC CAGCCGGGCG ATAACCTGAT CATCACCGAG
ATGGAACACC ACGCGAATAT CGTTCCCTGG CAGATGCTGG CGGAAGCGCG TGGCGTTGAG
GTTCGCGTAT TGCCGCTGGC CGAAGATGGC TCACTGGATG TTGCGCAGCT TCCTGGATTA
CTGGATGAGC GAACTCGCCT GCTGGCAGTA ACGCAAATCT CTAACGTACT CGGTGCGCTA
AACCCAGTTA AGACCATGAT CGCACAGGCA AAAGCAGTTG GCGCGGTTAC GTTGGTCGAT
GGTGCGCAGT CGATTATGCA TCAGACTGTC GATGTGCAGG ATCTGGACTG TGATTTCTTT
GTCTTTTCAG GACATAAGAT CTACGGCCCT TCGGGTATTG GCGTGCTGTA CGGCAAACGT
GACCTGCTTC AGGCTATGCC GCCTTGGGAA GGTGGCGGGG CGATGATTCG TCAGGTTAGC
CTGCGCACAG GCACCACCTA TGCGGATTCA CCGTGGCGCT TTGAGGCTGG TTCGCCCAAT
ACTGGCGGTA TCATGGGCTT AGGCGCGGCG TTGGACTATG TGACGGCGTT GGGGCGGGAA
GAGATTCAAC GTTATGAATC CTCGCTGATG AAGTATGCGC TGGAGGCACT AAAGCAAGTG
CCCGATCTGA CGTTGTACGG CCCTGCTGAG CGTCACGGCG TCATTGCGTT TAATCTTGGG
CAGCACCACG CCTATGATGT TGGAAGTTTC CTCGATCGGT ACGGTATTGC GATTCGCACC
GGCCACCATT GCGCGATGCC GCTGATGGAA CATTACGGTG TTCCCAGTAT GTGCCGCGCC
TCGCTGGCAG TTTATACTAC GCGCGAAGAA ATTGACCGGC TGGTTGCCGG ATTGCAACGT
ATCCATCGAT TGCTGGGCAG TTAA
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| Protein sequence | MSYPIERVRA DFPLLASEVN GQPLAYLDSA ASAQKPQSVI EREAEFYRHE YAAVHRGIHT
LSAQATSAME AVREQVAAFI NAASVEEIVF VRGTTEAINL VANSYGRTFI QPGDNLIITE
MEHHANIVPW QMLAEARGVE VRVLPLAEDG SLDVAQLPGL LDERTRLLAV TQISNVLGAL
NPVKTMIAQA KAVGAVTLVD GAQSIMHQTV DVQDLDCDFF VFSGHKIYGP SGIGVLYGKR
DLLQAMPPWE GGGAMIRQVS LRTGTTYADS PWRFEAGSPN TGGIMGLGAA LDYVTALGRE
EIQRYESSLM KYALEALKQV PDLTLYGPAE RHGVIAFNLG QHHAYDVGSF LDRYGIAIRT
GHHCAMPLME HYGVPSMCRA SLAVYTTREE IDRLVAGLQR IHRLLGS
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