Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2399 |
Symbol | |
ID | 8133344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2758355 |
End bp | 2759413 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865680 |
Product | ABC transporter periplasmic binding protein, urea carboxylase region |
Protein accession | YP_003017966 |
Protein GI | 253688776 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAT CTCGTTTACT GGGCGTTTGC GTCCTCAGTC TCTCAGCCTT GCTGAGCTTC CCTTCTCAGG CGGCGCCTAA AACGCAATTC AATGTGTGCT GGACTATCTA TGCAGGATGG ATGCCGTGGG GGTTCATCGG CACGCAGGGC ATTATCGATA AATGGGCCGA CAAGTACGGC ATCAAGATTA AGGTCACCCA GCTCAACGAC TACGTCGAGT CGATCAACCA ATACACCGCC GGACAATTTG ACGGCTGTAC GATGACCAAC ATGGATGCGC TGACTATTCC AGCCGCGGGC GGTGTGGATA CCACGGCGCT GCTGCTCGGT AGTTTCTCCG CAGGCAACGA CGGTATTGTG CTCAAAGGCA AAGGGAAAAC GCTGAGCGAT TTGCGTGGGA TGAAGGTCAA CCTGCCTGAA CTCTCGGTCT CGCATTACCT GCTGGTGCGC GGTCTGGAAA CCGCTGGCTT GAGAGAACGG GATGTCACGG TCGTCAACAC GTCGGATGCC GATATTGTCG CTGCCTTTGC TACCCGCAGC GTGCAGGCGG CTGTCGCCTG GAACCCGCAG CTTTCTGCAA TCAAAAGCCA GCCGGACACC ACGGAAGTCT TTCAGTCCGG TCAGATCCCC GGTGAGCTGA TCGACATGAT GGTCGTGAAC ACTCAGACGT TACAGGACAA TCCGGCGTTG GGCAAAGCGC TGGCTGGTGC CTGGTTTGAA ATGATGGCAC TAATGAAAGC GGGCGATAAA CCGGCGCTGG AGTCAATGGC TGCTGCTTCC GGCACCGACT TGGCCGGCTA TCAGGCCCAG TTAAAAACCA CCCATCTGTT TTATTCCGCG CAGGACAATC TGGCGTTTCT GACCAGTTCA GATCTTCCTA ACACCATGAA GCGCGTCGCG GATTTCTCCT TCGATAAAGG GCTGCTCGGC GCAGGCGCAC AGAGTGCGGA TTTTATCGGC ATGACATTCC CCGGACAGGT CACACAGGGT GACCGTGCCA ATGTGAAACT GCGCTTTGAC GACACTTTCG TGCGTCTGGC CGCAGAACAC AAACTCTGA
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Protein sequence | MNLSRLLGVC VLSLSALLSF PSQAAPKTQF NVCWTIYAGW MPWGFIGTQG IIDKWADKYG IKIKVTQLND YVESINQYTA GQFDGCTMTN MDALTIPAAG GVDTTALLLG SFSAGNDGIV LKGKGKTLSD LRGMKVNLPE LSVSHYLLVR GLETAGLRER DVTVVNTSDA DIVAAFATRS VQAAVAWNPQ LSAIKSQPDT TEVFQSGQIP GELIDMMVVN TQTLQDNPAL GKALAGAWFE MMALMKAGDK PALESMAAAS GTDLAGYQAQ LKTTHLFYSA QDNLAFLTSS DLPNTMKRVA DFSFDKGLLG AGAQSADFIG MTFPGQVTQG DRANVKLRFD DTFVRLAAEH KL
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