| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2385 |
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| Symbol | |
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| ID | 8133329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2742912 |
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| End bp | 2743583 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865665 |
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| Product | ribonuclease T |
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| Protein accession | YP_003017952 |
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| Protein GI | 253688762 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0167921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATA AAAGTGATCT GAACGCCCTG AGCGGTCGTT TTCGTGGGTT TTACCCGGTA
GTGATTGATG TTGAAACTGC CGGATTCAAT GCGAAAACAG ATGCCTTGCT GGAAGTTGCG
GCGGTAACAT TAAAAATGGA TCAAGACGGT TGGTTGCAGC CAGATGAAAC GCTACATTTT
CATGTTGAGC CATTCGAAGG CGCGATCCTC GAACCCGCCG CGCTGGCATT TAACGGTATT
GACCCCACAA ACCCGCTACG CGGTGCAGTG AGCGAATATG ATGCACTGCA TGAAATTTTC
AAAGTCGTGC GCAAAGGGAT CAAGGAGCAA AACTGTAATC GTGCCATTAT CGTGGCGCAT
AACGCCACAT TCGATCACAG TTTCATGATG GCAGCAGCAG AGCGCTGTAG CCTGAAACGT
AACCCGTTCC ACCCTTTCGC TACCTTCGAT ACCGCCGCAC TCAGCGGGCT GGTGCTGGGC
CAAACCGTAC TAGCTAAGGC CTGTATTACC GCAGGGATTG CGTTTGACTC CAGTCAGGCA
CACTCCGCGC TGTATGACAC CAACCAGACG GCATTACTGT TCTGTGAGTT GGTTAATCGC
TGGAAACGCC TGGGCGGCTG GCCGATTGCG CTGGAAGAAA ATTCGCTGGA AGACGTGTCA
GCCGAAGACT GA
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| Protein sequence | MADKSDLNAL SGRFRGFYPV VIDVETAGFN AKTDALLEVA AVTLKMDQDG WLQPDETLHF
HVEPFEGAIL EPAALAFNGI DPTNPLRGAV SEYDALHEIF KVVRKGIKEQ NCNRAIIVAH
NATFDHSFMM AAAERCSLKR NPFHPFATFD TAALSGLVLG QTVLAKACIT AGIAFDSSQA
HSALYDTNQT ALLFCELVNR WKRLGGWPIA LEENSLEDVS AED
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