Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2384 |
Symbol | |
ID | 8133328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2742358 |
End bp | 2742765 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644865664 |
Product | lactoylglutathione lyase |
Protein accession | YP_003017951 |
Protein GI | 253688761 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | [TIGR00068] lactoylglutathione lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0115374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTAC TTCACACCAT GCTGCGTGTT GGCGATTTAC AACGTTCTAT CGATTTTTAT ACTCAAGTTC TGGGAATGCG CGTGCTGCGC ACCAGCGAAA ATACCGAATA CAAATACACG CTGGCTTTCG TCGGTTATAC CGAAGAGAGC GAAGGTGCGG TTATTGAACT GACCTACAAC TGGGGCGTCG ACAGTTATGA TCTGGGCAAC GCCTATGGTC ACATCGCACT GGGCGTCGAC GATGTTGCCG CAACCTGTGA GCGTATCCGC AAAGCAGGTG GCAATGTCAC GCGCGAAGCC GGTCCGGTCA AAGGCGGCAC CACCGTCATC GCGTTCATTG AAGATCCAGA CGGTTATAAA ATCGAATTGA TCGAAAACGC CCACGCGGGT AATGGCATCG GCCGCTAA
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Protein sequence | MRLLHTMLRV GDLQRSIDFY TQVLGMRVLR TSENTEYKYT LAFVGYTEES EGAVIELTYN WGVDSYDLGN AYGHIALGVD DVAATCERIR KAGGNVTREA GPVKGGTTVI AFIEDPDGYK IELIENAHAG NGIGR
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