Gene PC1_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2381 
Symbol 
ID8133325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2740566 
End bp2741033 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content54% 
IMG OID644865661 
Product17 kDa surface antigen 
Protein accessionYP_003017948 
Protein GI253688758 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00375113 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC GTTTACTTGT GGTTACCCTT GCAGGTATCA CGCTGGCTGG TTGTGCTAAT 
ACCAGTACGC TTTCAGGTGA TGTTTACAGT GCATCCGAAG CTAAACAGGT ACAGACCGTT 
ACCTACGGTA CGATTGTTTC TACGCGCCCG GTTCAGATTC AGGCGGGAGA AGATTCTAAC 
GTGATCGGCG CACTGGGTGG TGCCGTATTG GGTGGTTTCC TGGGTAACAC TATCGGCGGC 
GGTTCCGGTC GTAGTCTGGC AACAGCAGCT GGCGCAGTCG CCGGCGGTGT AGCGGGTCAA 
AGCGCCACAG GTGCACTGAA CCGCACGCAA GGTGTAGAAC TGGAAATTCG TCGTGATGAC 
GGTAGTACCA TTATGGTGGT ACAGAAACAA GGCGATACGA AATTCAGCGC AGGTCAACGC 
GTTGCTATGG CCAGCAATGG CCGCAGTATC ACCGTTTCTC CACGCTGA
 
Protein sequence
MMKRLLVVTL AGITLAGCAN TSTLSGDVYS ASEAKQVQTV TYGTIVSTRP VQIQAGEDSN 
VIGALGGAVL GGFLGNTIGG GSGRSLATAA GAVAGGVAGQ SATGALNRTQ GVELEIRRDD 
GSTIMVVQKQ GDTKFSAGQR VAMASNGRSI TVSPR