| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2378 |
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| Symbol | |
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| ID | 8133322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2737899 |
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| End bp | 2738582 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865658 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_003017945 |
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| Protein GI | 253688755 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.25247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCAGG AACGCACGCC CTCTGACAGT ACTCCTCTTC TTCAACCCGC CGATATTGCC
GACATTCGCC GTGAATACGC ACGTGGCGGG CTTCGTCGTA GCGATCTTCC CGCTAACCCA
CTGGATTTAT TTGAACTCTG GTTGAAGCAG GCCTGTGACG CGAAGCTGGT CGATCCTACC
GCAATGTCCG TCGCGACCGT TGATGAGCAT GGGCAACCTT ACCAGCGCAT CGTTCTGCTT
AAGCACTATG ACGAGAAAGG CATGGTGTTT TATACCAATA TGGGCAGTCG CAAAGCCCGT
CATCTGGAAA ACAACCCACG TATCAGCCTG TTGTTCCCTT GGCATATGCT GGAACGCCAG
GTGATGGTTC TGGGTCGCGT AGAGAAGCTC CCCACGCTTG AGGTGCTGAA ATATTTCCAC
AGTCGCCCGA AAGACAGTCA GATTGGCGCG TGGGTATCCA AGCAGTCCAG CCGGATTTCA
GCGCGCGGTG TGTTGGAAAG CAAATTTTTG GAATTGAAGC AAAAATTCCA GAATGGCGAG
GTGCCTTTGC CGAGTTTCTG GGGAGGCTTC CGCGTCGTTA TCGATTCTGT CGAATTTTGG
CAGGGCGGAG AACACCGCTT GCACGATCGA TTTTTCTACC AGCGACAGGA AGAAGGCTGG
CAGATTGATC GTTTAGCGCC TTAA
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| Protein sequence | MTQERTPSDS TPLLQPADIA DIRREYARGG LRRSDLPANP LDLFELWLKQ ACDAKLVDPT
AMSVATVDEH GQPYQRIVLL KHYDEKGMVF YTNMGSRKAR HLENNPRISL LFPWHMLERQ
VMVLGRVEKL PTLEVLKYFH SRPKDSQIGA WVSKQSSRIS ARGVLESKFL ELKQKFQNGE
VPLPSFWGGF RVVIDSVEFW QGGEHRLHDR FFYQRQEEGW QIDRLAP
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