Gene PC1_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2367 
Symbol 
ID8133311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2723900 
End bp2725069 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content54% 
IMG OID644865647 
Producttetratricopeptide repeat protein 
Protein accessionYP_003017934 
Protein GI253688744 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000126783 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAC TGCTGTTTCT GTTGCTGCCC GTGGCCGCCG CGTACGGCTG GTACATGGGT 
CGCAGAAGTG CGCAGCAGGA CAAAGAGCAG GAATCTAACC GCCTGTCCCG TGAGTATGTC 
ACCGGGGTTA ACTTCCTGTT GTCCAATCAG CAGGATAAGG CGGTTGAACT GTTCCTCGAC 
ATGCTCAAGG ATGACAGCAA CACTTTTGAA GCCCACCTCA CGCTCGGTAA CCTGTTCCGT 
TCGCGCGGCG AAGTTGACCG TGCGATTCGC ATCCATCAGG CGCTAACCGA AAGCGCATCG 
CTCACCTTTG AACAACGTTT GTTGGCGGTA CAACAACTGG GTCGTGACTA CATGGCTGCG 
GGGCTGTACG ACCGCGCCGA AGAAAGTTTC AACCAGTTGG TGGATGAAGA AGATTTCCGG 
CGCAGCGCCT TGCAACAGCT CTTGCAGATT TATCAGGCGA CCAGCGACTG GCCGGCGGCG 
ATTGATGCTG CAGAAAAATT GGTCAAGATG GGAAAAGATC AGCTCCGCGT GGATATCGCC 
CATTTTTATT GCGAATTGGC GCTGCTGGCG ATGGGCAGTG ACGATCTGGA TAAAGCGTTA 
ACGCTCCTGA AGAAAGGTGC GGCGGCGGAT AATCAGTGCG CCCGTGCGTC TATCATGATG 
GGGCGCATTT ATATGGCACA GCAGGATTAT TCGCGTGCCG TGGAAGCGCT GCGACAGGTT 
CTCGATCAGG ATAAAGAACT GGTCAGTGAA ACACTGCCGA TGCTCCAGGA GTGCTATCAG 
CATTTAGATA AACCCTTGGA TTGGGAGAAT TTTCTCAAAC GCTGCGTAGA AGAAAATACC 
GGTGCGACGG CGGAATTGAT GCTGGCCGAC ATCCTCGAAA GAGAAGAGGG GGCAGAGGTT 
GCACAGGCTT ATATTAACCG TCAGTTGCAA CGTCACCCGA CAATGCGCGT GTTCCATCGC 
CTGATGGATT TTCACCTGCA TGAAGCGGAA GACGGACGAA CAAAAGAAAA TCTTCAGGGG 
TTGCGCGACA TGGTGGGCGA ACAGATTCGC ACCAAACCCC GCTACAGTTG CCGCAAATGT 
GGCTTCACGT CGCAATCACT CTATTGGCAG TGTCCTTCCT GCCGCACCTG GGCCAGCATA 
AAGCCGATCC GTGGGCTCGA CGGCCAGTAA
 
Protein sequence
MLELLFLLLP VAAAYGWYMG RRSAQQDKEQ ESNRLSREYV TGVNFLLSNQ QDKAVELFLD 
MLKDDSNTFE AHLTLGNLFR SRGEVDRAIR IHQALTESAS LTFEQRLLAV QQLGRDYMAA 
GLYDRAEESF NQLVDEEDFR RSALQQLLQI YQATSDWPAA IDAAEKLVKM GKDQLRVDIA 
HFYCELALLA MGSDDLDKAL TLLKKGAAAD NQCARASIMM GRIYMAQQDY SRAVEALRQV 
LDQDKELVSE TLPMLQECYQ HLDKPLDWEN FLKRCVEENT GATAELMLAD ILEREEGAEV 
AQAYINRQLQ RHPTMRVFHR LMDFHLHEAE DGRTKENLQG LRDMVGEQIR TKPRYSCRKC 
GFTSQSLYWQ CPSCRTWASI KPIRGLDGQ