| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2365 |
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| Symbol | |
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| ID | 8133309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2721704 |
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| End bp | 2722447 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865645 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_003017932 |
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| Protein GI | 253688742 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00411162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG AGAATCTACA GCAAAAGCAT CAAACGGTAT CATCCCCGAT TGTGGTCGCG
CTGGACTATG CCAGTCAGCA GGCGGCGCTG TCGTTTGTTG ACCGTATCGA TCCGCAGGAT
TGCCGTTTGA AGGTAGGCAA AGAGATGTTT ACCTTGTTCG GCCCGCAGTT CGTGCAGACG
TTACAACAGC GCGGCTTTGA TGTGTTTCTC GATCTGAAAT TCCACGATAT TCCAAACACC
GTCGCTCACG CCGTTGCGGC AGCGGCCGAT CTTGGCGTGT GGATGGTGAA TGTCCACGCC
AGCGGTGGTT CGCGCATGAT GGTGGCCGCG AAAGAGGCGC TGGTACCGTT TGGTAACGAT
GCGCCGCTGC TGATTGCTGT AACGGTGTTA ACCAGCATGG ATGAAGACGA TCTGCGCGGG
CTTGGCATTA CCGTCAGCCC GGCTGAGCAG GCGGAAAGGT TGGCTGTGTT AACGCATAAC
AGCGGGCTGG ATGGCGTGGT GTGTTCCGCG CATGAAGCCC AGCGATTGAA GCAGGTATGC
GGTCAGGCAT TTAAGTTGGT CACGCCAGGT ATTCGTCCTG CGGGTAGCGA CGTTGGCGAT
CAGCGCCGCA TCATGACGCC GGTGCAGGCG CAGCAGGCGG GGGTGGATTA CATGGTTATT
GGACGTCCGA TCACCCAATC TGCGGATCCG GCACAGACGC TGCGCGAGAT TCGCGTTTCA
CTGTTAAACG GTGCGTCATC ATGA
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| Protein sequence | MKNENLQQKH QTVSSPIVVA LDYASQQAAL SFVDRIDPQD CRLKVGKEMF TLFGPQFVQT
LQQRGFDVFL DLKFHDIPNT VAHAVAAAAD LGVWMVNVHA SGGSRMMVAA KEALVPFGND
APLLIAVTVL TSMDEDDLRG LGITVSPAEQ AERLAVLTHN SGLDGVVCSA HEAQRLKQVC
GQAFKLVTPG IRPAGSDVGD QRRIMTPVQA QQAGVDYMVI GRPITQSADP AQTLREIRVS
LLNGASS
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