Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2364 |
Symbol | |
ID | 8133308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2721372 |
End bp | 2721707 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644865644 |
Product | translation initiation factor Sui1 |
Protein accession | YP_003017931 |
Protein GI | 253688741 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0271288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGC GTCGTGACGA AAATAGCCAA CTGGTTTACT CCACGGAAAC CGGGCGTATT AAGCCGGAAG AAGAAAAGGC GGTTCGACCA AAAGGCGATG GGATTGTGCG CATCCAGCGT CAGACGAGTG GACGTAAAGG AAAGGGCGTA TGCCTGATTA GCGGCCTCGA TCTTGACGAT GTTGCTTTGG ATAAGCTGTC GGCTGAATTG AAGAAAAAAT GCGGCTGTGG CGGTTCAGTG AAAGATGGTG TGATCGAAAT TCAGGGAGAT AAGCGCGATC TGCTAAAACA GCTTCTGGAA GCGAAAGGAC TGAAGGTTAA GCTGGCCGGT GGCTAA
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Protein sequence | MNMRRDENSQ LVYSTETGRI KPEEEKAVRP KGDGIVRIQR QTSGRKGKGV CLISGLDLDD VALDKLSAEL KKKCGCGGSV KDGVIEIQGD KRDLLKQLLE AKGLKVKLAG G
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