Gene PC1_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2291 
Symbol 
ID8133235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2636025 
End bp2638616 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content57% 
IMG OID644865578 
Producthypothetical protein 
Protein accessionYP_003017865 
Protein GI253688675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0813621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA AACATGCACT TCCAATCGCT TTCCTGCTTG TCGCGCTGCT GTTTCTTTCC 
TGGCGAACGC TGCCGCAGTG GCTGCCACGC ATCGCCACAA TCTGGCTGCC CACGGAGATG
TCTTTAGTCG TGAATGGGGT GCCTGGCTGG CAGGGCGGTG GGCCATATAG CGCGGGGTTC
AGCATTATGG CTGGCGAGTG CCAGCTCGTT GACGTACGGA ATATGACGCT GCGTTGGCAT
GGCTGGCGAT GGCATGTCGC GATTGATGCC GTGACGTTAA ACAGCGATTG TCTGCAGCAT
GTGCCAGCGA GTAGCCGTTC CGAATCCCCA GCACAGCTGG CGCAGTGGCA ACAGCGATTG
CCTGCTGCCG ATATTCAGAT AAAAGCGTTT ACGCTGCTGC CCTGGCAGGA TTATGCCGGG
CAGGTGCGAC TCAGTAGTGA CGGTAAACGG CGACAAACGC TGGATTATCA GGGCGATCAA
CTGGTGGTTA GGGCTGAACT GAATGAGACA CAGCTGACCC TGCATGAAGG TATGCTCGCC
ACGCCCGCGG GATTTGTACG TCTACAGGTC AGCGGTGAAA TGACGTTGGC CGATACGCTG
GATGCCGCGC CGATACAGGG ACGACTTACC GGAAAACTGG ATTCAGGACA GACGCCGGAT
CCACTTTCGC TCCTGCTGGA CTGGCATCAT CAAGCTGGTG AATTAGTGCT GAATGCGGCA
AATGACGACA CGCCGCTGAT ATCGCTGCCG TGGCAACTGA CGGATGAGGT AATTCAGGTC
ACTAACGGCG TCTGGCGTTG GCCTTATGCC GATCAGCCAC TTTCAGGGCA GGTCGCCATG
ACGTTACAGC ATTGGCGACA AGGGCTGGAT GCCACCACGA TTAATGCGCG TTTGAATATG
TTGACGCAAG GGCATAACGG TAAGGCGAAC GCTGTACTGG TGCTGGGGCC GGGCAATATT
GGCCTGCTCA ACAGCGAATT GCGCTTTCAG CTTACCGGGC AGGCTAATTT ACCGGCACTC
TCCCTGACGG CGACGCTACC GGGGGTGTTG CAAGGTTCGA TCCTCAATCC TGAACTCGCT
CTTTTACCGG GGGCGTTGCT ACGTGCCTGG GGAACGCCTG CGCCGCAGGT TTATCTGGAA
GAGGCGCGCT GGCCGTTGGC GGGCGTTCGG GTCAGTGCGA CCGGCGTGAA TGGACGACTA
CAGGCGATTG TGAAAGCGCG AGAAGCATAC TGGGGACGTT TTAACCTGCA CCTTGACGGT
CAGGCACAGG ATTTCTGGCC GGATCAAGGG CAGTGGCAAT GGCGTTATTG GGGCAATGGC
CACCTGCCGC CGCTGAAAGG TCAGTGGGAC GTGGCCGGGC GCGGGCAGTG GCAGGACACC
CTGCTCGAAG TCAGCCAGTT GTCGAGCGGT CTGGATCAAT TGGGTTATGG CATTGTGACG
GTGCACCAGC CTCGGCTGAC GATTACGGAG CCGATCCGCT GGCAGCGCGC CCGTTCTGGT
GAGCACTTTC AAGGGGCGCT GCAACTGGCC TCAGAGCGGA CGCATTTCAG CAACGGTGGC
TATCTGCCTC CTTCGTTGTT AACGCTGGCG ATGCAGGGGC GCAGCCCGGA TGATTTCCAG
CTACAGGGAC AGCTTCAGGC TGAAGATATC GGCCCGGTCA GGCTGCGTGG GCGTTGGGAT
GGTGAGCGAC TGCGCGGTGG TGCATGGTGG CCGACGCAGC CGCTTAAGGT GTTTCAGCCT
CTGCTTTCCC CACAGTTGAA AATGAACATT CGCGCCGGAC AGTTTTACGC ACAGGCGGCC
TTCTCCGCTG CACGTAAAGA AGGGTTCAGC GCGGGTGGGC ATTGGGTTGT GAAAAATGGC
GGGCTGTGGT TACAGGATGG TGAAGTCAGC GGCGTAAACT TTGTTCTGCC TTACCGCTTG
AAAGATCAGC GCTGGCAACT GGGCGTCAGG CAGCCCGTCA CGCTGCGAAT TGACGTACTG
GATAACTTGT TTCGCATGAG CAATATCCGC GTTGATCTTC AGGGTTTTTA CCCGTACAGC
GAACGACGAC CGCTGATTAT GTCTCAGGCG GATATGGACG TATTGGATGG GCATATCGGG
CTATCGACGC TGCGTTGGCC ACAGCGGGAA CCCGCGTTAT TTACCGTTAA GAGCGTGGAT
CTCAGCGAAC TGCTGACGGT GTTGAAGCAA AAGCAGTTCG CGCTGTCCGG GCGTGTGAGC
GGTACGCTTC CGTTGAATTT TAATCACCCC ACCATGTTGA TTGAAGGTGG ACGCATTACC
AATGATGGTT TCCTGACACT GCGATTGGAT AACCAACTGG CAGATGAGTT AGCGAGTAAA
AATCTGGCAG GCGGTGCGGC AATTGGCTGG TTGCGCTATC TGGAGATCGG GCGTTCCTAT
GCCACGCTTG ACTTGAGTAA TCAGGGTGAA CTGACATTAG CCTCGCAGGT GCAGGGGAAA
AATCCGCAGC TCAGTGCGAA TCGACAGGTT ATTCTTAACT ATCGCCATCA GGAGAATATC
TTCCAGCTAT GGCGCAGCTT ACGTTTTGGC GATAACTTGC GGGATACGCT GGAACAACAG
GCAAATGAAT AA
 
Protein sequence
MIKKHALPIA FLLVALLFLS WRTLPQWLPR IATIWLPTEM SLVVNGVPGW QGGGPYSAGF 
SIMAGECQLV DVRNMTLRWH GWRWHVAIDA VTLNSDCLQH VPASSRSESP AQLAQWQQRL
PAADIQIKAF TLLPWQDYAG QVRLSSDGKR RQTLDYQGDQ LVVRAELNET QLTLHEGMLA
TPAGFVRLQV SGEMTLADTL DAAPIQGRLT GKLDSGQTPD PLSLLLDWHH QAGELVLNAA
NDDTPLISLP WQLTDEVIQV TNGVWRWPYA DQPLSGQVAM TLQHWRQGLD ATTINARLNM
LTQGHNGKAN AVLVLGPGNI GLLNSELRFQ LTGQANLPAL SLTATLPGVL QGSILNPELA
LLPGALLRAW GTPAPQVYLE EARWPLAGVR VSATGVNGRL QAIVKAREAY WGRFNLHLDG
QAQDFWPDQG QWQWRYWGNG HLPPLKGQWD VAGRGQWQDT LLEVSQLSSG LDQLGYGIVT
VHQPRLTITE PIRWQRARSG EHFQGALQLA SERTHFSNGG YLPPSLLTLA MQGRSPDDFQ
LQGQLQAEDI GPVRLRGRWD GERLRGGAWW PTQPLKVFQP LLSPQLKMNI RAGQFYAQAA
FSAARKEGFS AGGHWVVKNG GLWLQDGEVS GVNFVLPYRL KDQRWQLGVR QPVTLRIDVL
DNLFRMSNIR VDLQGFYPYS ERRPLIMSQA DMDVLDGHIG LSTLRWPQRE PALFTVKSVD
LSELLTVLKQ KQFALSGRVS GTLPLNFNHP TMLIEGGRIT NDGFLTLRLD NQLADELASK
NLAGGAAIGW LRYLEIGRSY ATLDLSNQGE LTLASQVQGK NPQLSANRQV ILNYRHQENI
FQLWRSLRFG DNLRDTLEQQ ANE