| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2281 |
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| Symbol | |
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| ID | 8133225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2621500 |
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| End bp | 2624130 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865568 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_003017855 |
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| Protein GI | 253688665 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCAG AACCGACGAA ACAGCAGCGT TCCGCCGCCC CTTATCGCGC AGTCCGTCCA
TGCCTGCGTT GGTATCCGGC CGTGATGCTG TACATGGCAT TCCCACTCGC TGGTGATGCT
GAGACTTTCT TTAATCCGAC ATTTTTATCG GACGATCCTT CGGCTATTGC CGATCTCTCT
CGCTTTGATA AAGGTGAAGG GCAACCACCG GGTATCTATC GGGTAGAGAT TTATGTTAAC
GCAGAATATG CGTTTTCTCG TGATGTTGCG TTTCAACTAC GCACGCCATC CGATAAACCG
TCCAGTGATG ATACAGGTCT TGAGCCTTGC CTGCCGATAG CGTTGCTGGA ACAACTTAAT
GTCAATCTAC AGTCGTTTCC TTCTTTACGT GATGAACCGG CTTCCGCATG CATCAACGTG
CCTCAGGCGA TTCCCGATGC CAGCGTGCGC TTTGACTTTG AACTCCAGAG ATTGAACATC
AGCTTGCCGC AAATTGCGCT AAAAAATGCC GGGCGAGGAT ATATTCCGCC GGAGGAGTGG
GATGAGGGCA TCACGTCAGC GTTATTTAAT TACCAGTTCA CGGGCAGTAA TACGCACGGC
GATGCTCGCA GTGACAGCTA TTTTCTTAAT CTTGATAGCG GAGTGAACTG GAACGGCTGG
CGGTTGCGCG ATTACTCTAC CTGGCGTTAT TCCCGCTATG CAAACCAGCG CTATAACGAA
TTCCAGCACG TCAGTACTTA TTTACAGCGT GCCATCATTC CCTGGCGCAG CGAATTGACT
CTCGGCGACA GCAATACAGT AGGCGAGGTT TTCGACAGTT TGGGATTTCG CGGCGTACAG
ATTGCGTCCG ATGACGCGAT GCTGCCGGAC AGCCTTAGAG GGTTTGCACC AACGATCAGG
GGGATTGCCA AAAGCAACGC CCGCGTCACC ATTCGACAAA ATGGCTATGT GATTTATCAG
GCTTATGTTG CGCCTGGTGC GTTCGAAATT ACCGACCTTT ACCCAACGTC ATCCAGCGGC
GATTTACAGG TAACCATTAC TGAGAGCGAT AACTCGACGA ACAGCTTTTT CGTGCCGTAT
TCCGCCGTGC CACTGCTCCA GCGTGAGAAC CGGATGAAAT ATTCCGCGAT GGTCGGTAAA
TACCGTAGCA ATAATCCACA ACAGGATCAG CCCTTGTTTG GTCAGGGGAC GCTGATCTGG
GGGCGTTCGG CTGGGGTGAC GTTGTATGGC GGCACACAAC TGGCTGAAGA TTATCAGGCA
CTGACGCTAG GTTCAGGGAA AAACCTCGGC GACTGGGGCG CATTTTCAGC CGATCTCACG
CAGGCTTATA GCACGTTGTC GGATGGTAGC GATCATAAAG GGCAGTCACT GCGTTTCCTG
TATGCCAAAT CGCTGAATGA TCTGGGGACG AATTTTCAGA TCCTGGGTTA TCGCTATTCA
ACCAAAGGTT TTTTTACGCT GGATGAAGCC AGCTATAAAA ACATGAGTGG TTATACGGTC
GACTTTACCG ATGTTCAACC TGTGGTTCGC GACTACTACA ACCTGAATAA CGCGAAAAAA
AGCAGGATGC AGATGAATAT CACCCAGCAG TTAGGGAAGG GAATGGGGTC GTTATTTTTA
ACGGGAAGCC GACAGGATTA TTGGCATACC AAGGGTACAA ACGATCTGTT GCAGGTCGGC
TACAGCAATG TGTACCGCGG TGTGAGTTAT AACCTGAGTT ACAGCTATAA CAAGAATCAA
GGGCTGGAAG AACGGAACCA GCTGTTTGCT TTTAACCTCT CTGTTCCACT GAGTCAGTGG
CTCAGTGGAC ATCGTGAAGG GATTAACCTG CGGCGTTCAC AGAATACGGC TTACGCTTCC
TACAACATGA CGTCGGACAA TCAAGGGCGC ACGTTACAGC AGGTAGGGCT CAGTGGCACG
ATGCTGTCGG ATGGCAATCT CAACTACAAC GTCTCCCAAG GGTATGGTAA TCGCGGCATT
GGGAATAGTG GGAACGCGGG GCTTGGCTAT CAGGGCACCT ATGGCAACAG CAACGCCAAC
TACAACTATA CGCGCAACAC TCGTCAGCTT AACTATGGGG TGAGCGGCGG AGTGGTGGCG
CATGCCGATG GAGTCACGTT TAGTCAGCCG CTGGGCGATA CCAACGTATT GATTAAGGTT
CCCGGTACCA GCCGTGTCAA AGTGGAGAAT ACCACCGGTA TCCAGACTGA CTGGCGTGGC
TATGCCGTTA TTCCTTACGC CAGCGTTTAT CGCAATAACC GCATTGCCCT CGACGTCAAT
TCGTTAAATC AAAACACAGA GGTCAACAAT ACTGTCGCCA ACCTTGTACC GACGCGAGGG
GCGATGGTTC GTGCCAGCTT TACCGCCTAT CAAGGCGGGC GTGCGCTAAT TTCGCTACAG
CAGCGTAATG GCCGACCGGT TCCTTTTGGT GCGCTTGTCT CCCGTGTAGA CAGCGATAGC
ACCGGTATTG TTGGTGACGA TGGGCAGGTC TTCCTGTCTG GGCTAACCCC TGAAGGCGAG
CTGAAGGTTG CATGGGGAAG TGGTTCACAG CAGCAATGTA CGCTTCGCTA CGCTCTTCCA
GACGGCAGTG AAAACCAACC GGTATCCTAT ACGAAGGCGG TATGTCAATG A
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| Protein sequence | MRSEPTKQQR SAAPYRAVRP CLRWYPAVML YMAFPLAGDA ETFFNPTFLS DDPSAIADLS
RFDKGEGQPP GIYRVEIYVN AEYAFSRDVA FQLRTPSDKP SSDDTGLEPC LPIALLEQLN
VNLQSFPSLR DEPASACINV PQAIPDASVR FDFELQRLNI SLPQIALKNA GRGYIPPEEW
DEGITSALFN YQFTGSNTHG DARSDSYFLN LDSGVNWNGW RLRDYSTWRY SRYANQRYNE
FQHVSTYLQR AIIPWRSELT LGDSNTVGEV FDSLGFRGVQ IASDDAMLPD SLRGFAPTIR
GIAKSNARVT IRQNGYVIYQ AYVAPGAFEI TDLYPTSSSG DLQVTITESD NSTNSFFVPY
SAVPLLQREN RMKYSAMVGK YRSNNPQQDQ PLFGQGTLIW GRSAGVTLYG GTQLAEDYQA
LTLGSGKNLG DWGAFSADLT QAYSTLSDGS DHKGQSLRFL YAKSLNDLGT NFQILGYRYS
TKGFFTLDEA SYKNMSGYTV DFTDVQPVVR DYYNLNNAKK SRMQMNITQQ LGKGMGSLFL
TGSRQDYWHT KGTNDLLQVG YSNVYRGVSY NLSYSYNKNQ GLEERNQLFA FNLSVPLSQW
LSGHREGINL RRSQNTAYAS YNMTSDNQGR TLQQVGLSGT MLSDGNLNYN VSQGYGNRGI
GNSGNAGLGY QGTYGNSNAN YNYTRNTRQL NYGVSGGVVA HADGVTFSQP LGDTNVLIKV
PGTSRVKVEN TTGIQTDWRG YAVIPYASVY RNNRIALDVN SLNQNTEVNN TVANLVPTRG
AMVRASFTAY QGGRALISLQ QRNGRPVPFG ALVSRVDSDS TGIVGDDGQV FLSGLTPEGE
LKVAWGSGSQ QQCTLRYALP DGSENQPVSY TKAVCQ
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