Gene PC1_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2266 
Symbol 
ID8133210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2606712 
End bp2607515 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content56% 
IMG OID644865553 
ProductFAD-binding 9 siderophore-interacting domain protein 
Protein accessionYP_003017840 
Protein GI253688650 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGC CGCGTCAGCC TGTTTTAGTT CAGGTTAAAC AGATCCACGA TATTTCCCCT 
CATTTGCGCT GCATTACTTT CCAGCATGAC GCGTTGCACG ATTACCCAGC CGAACGCTAT
GGCGCGCATA TTAAACTTTT TCTGCCACAG GCGGGACAGC AAAAACCGGT TCTGCCAGCC
ATTGGCGAAC GCGGCCCGGT CTGGCCGGAG GGCGAAGCCC GCCCTATCGT TCGCACCTAT
AGCGTCCGCG CACTGCGACC GGAAGAGGCG GAGCTGGATA TGGTTTTCGC GCTGCATGAT
CACGCTGGTC CTGCCGTCGT CTTTGCCCGT CAGGCCAAGC CCGGTGACTG GGTCGGTATT
TCACAACCCG GCGGCCCGCT CCCTATGCTG CCGCCAGCCG CCGCTTATTA CCTGGCTGCT
GACCCATCAT CGCTCCCCGC ACTGATGGCG CTGTTGGAGA ACCTGCCTGA CGACGCTCAG
GGACATGCCG TCATTCGTGT CGACAGCGAG GCAGATAAGC TCGATATCGT TAAACCATCA
CAGCTTCAAC TGCACTGGAT CGTCGGCGGA ACAGACGCGA CCGATACGCT GTTGCAACGC
TTTCAGGCAC TTCCAACAGC TGAAAATGCA TTTTACTGGT TAGCGGGTGA GGATCGTATC
GTGGTTCAGC TTCGTCGCCA TGTGCGTCGC GAACGCGGGT GTGAACGAAA TCAGATGTAT
GCAGTGCCTT ATTGGCGAGA GGGGTTAAAT GAAGAGGATT ATCACCATAA ACGCCACGAT
ATCATGGACA ATCCTGACGA ATAA
 
Protein sequence
MATPRQPVLV QVKQIHDISP HLRCITFQHD ALHDYPAERY GAHIKLFLPQ AGQQKPVLPA 
IGERGPVWPE GEARPIVRTY SVRALRPEEA ELDMVFALHD HAGPAVVFAR QAKPGDWVGI
SQPGGPLPML PPAAAYYLAA DPSSLPALMA LLENLPDDAQ GHAVIRVDSE ADKLDIVKPS
QLQLHWIVGG TDATDTLLQR FQALPTAENA FYWLAGEDRI VVQLRRHVRR ERGCERNQMY
AVPYWREGLN EEDYHHKRHD IMDNPDE