Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2265 |
Symbol | |
ID | 8133209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2605588 |
End bp | 2606274 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644865552 |
Product | ChaC family protein |
Protein accession | YP_003017839 |
Protein GI | 253688649 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.118123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAACAC GCGATTTTTT GCAGAAAGCA GATTGTAGAA CGTCTTTTGG TTGTATTGAG GAAACCTTAC TGCTCACGCC GCAACAGCGG GCTGATTCGT TGGACAGAAT GCTGGCGCTC CGGCCCAATA GCTGTCCGGT CTGGGTATTT GGCTACGGTT CGCTGATGTG GAACCCGGTT TTTGACGCTG AAGAAACCTG TCTTGCCACG CTGACAGGGT GGCAGCGTGC CTTTTGCCTG CGCCTCACCA TCGGCCGCGG CACGGTAACC CAGCCGGGAC GGATGCTGGC GTTGCAGCCC GGTGGACAAA CGACAGGTCT GGCTTTCCGT TTACCGGAAG CGTCTCTGCG TGAAGATCTG GAGCTGCTGT GGAAGCGTGA AATGCTGACG GGCTGCTATC GTCCGCTCTG GTGTGAGCTG CAGCGGAAAA ACGGCGCACC GCTGACGGCG CTGGTGTTTG TATCCGAACC GGAACACCCT TTGAATGAAA ATGATACCTG TATTCAGAGC GTTGCCCCGC TGATTGCCCG TGCGAGCGGC CCGCTCGGCA CCAATGCACA ATATCTGTTT GCGTTGGAGC AGGAGCTGAA AAATCACGGG ACGGAAGATG CAAGCGTGAG CGAACTGGCG CAGCGAGTGC GTATTCTGCA ACAGTCGTGT TCTGCGGCAG CAGGGAACGG ACAATAA
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Protein sequence | MLTRDFLQKA DCRTSFGCIE ETLLLTPQQR ADSLDRMLAL RPNSCPVWVF GYGSLMWNPV FDAEETCLAT LTGWQRAFCL RLTIGRGTVT QPGRMLALQP GGQTTGLAFR LPEASLREDL ELLWKREMLT GCYRPLWCEL QRKNGAPLTA LVFVSEPEHP LNENDTCIQS VAPLIARASG PLGTNAQYLF ALEQELKNHG TEDASVSELA QRVRILQQSC SAAAGNGQ
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