| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2260 |
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| Symbol | |
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| ID | 8133204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2598463 |
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| End bp | 2599851 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865547 |
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| Product | nitrite transporter |
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| Protein accession | YP_003017834 |
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| Protein GI | 253688644 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.282493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGC CTTCATCACC CGAAAAAGTA TCGCAAAGTA CGCTGATCAG GGAATGGAAC
CCTGAAGATA CAAAATTCTG GCAATCTGGT GGCCAACGGA TAGCACAGCG TAACCTTTGG
ATCTCTGTTC CCTGCTTGCT GTTGTCGTTT TGTGTCTGGA TGATATTCAG CACTGTAGCC
GTTAACCTAA ACAAGGTCGG GTTTCGTTTT ACCACAGATC AGTTATTTTT ACTGACCGCG
CTGCCTTCCG TCTCCGGCGC GCTGTTGCGT GTGCCTTACT CCTTCGTTAT CCCGTTGGTT
GGCGGTCGCC GCTGGACGAC GCTGAGTACT TTCATTCTGA TTATCCCGTG TATCTGGCTC
GGGTTTGCCG TACAAGACCC GCACACGCCT TACAATATTT TCGTGACGAT TTCCCTGCTG
TGTGGTTTTG CGGGCGCAAA CTTCGCCTCC AGCATGGCTA ACATCAGCTT CTTCTTCCCC
AAATCACGGC AGGGCAGCGC GCTCGGCATT AACGGCGGCT TGGGTAACCT CGGTGTGAGC
GTGATGCAAC TGCTGGTGCC GGTGGTGATC TTCCTGCCAA TTCTGGGCTT CTCCGGCAAT
GGCGTTGCTC AGCCAGACGG CCATCAGATT TGGTTGCACC ATGCGGCATG GATGTGGGTA
CCGTTTTTGG TGATTGCTGC AACCGCGGCT TGGTTTGGCA TGAACGATCT TCCTGCGCCT
AATGCGTCAA TACGCAAGCA GTTGCCAGTT CTGAAGCAAA TGCACCTGTG GGTGCTCAGC
TTCCTGTATT TGTCCACGTT TGGCTCATTT ATCGGTTTTT CTGCGGGTTT CGGCATGCTG
TCCAGAACGC AGTTCCCAGA CATTGTGATT CTGTACTACG CGTTCTTCGG GCCGCTGCTG
GGGGCGTTGG CGCGTCCGGT GGGCGGAATG CTGTCTGACC GTTTTGGCGG TGTGAAAGTT
ACGCTGATTA ACTTCATTCT GATGGCGATT TTCTCGGTGT TGCTGTTCCT GTCTCTGCCG
AGTGCGAACT CTGCGGGTTC ATTCGAGATG TTCTTTGGCA TCTTCATGAT GCTGTTCCTG
ACGGCAGGTT TGGGGAGTGG CTCAACCTTC CAGATGATTG CGGTGATTTT CCGTAAATTA
ACGGCGGATC GTGTTAAATC GCAAGGCGGG AGCGATGCGG ATGCGCAGAG TACCGCAGCC
ACGGACACGG CGGCGGCGCT GGGCTTTATT TCGGCGATTG GCGCGATCGG CGGGTTCTTC
ATTCCTCAAG CCTTTGGGAT GTCGCTGGAG TTAACTGGCT CACCCACGGG GGCGATGAAG
GTGTTTGTGG TGTGCTATGT CGTGTGCATT CTGGTGACCT GGCTGTTCTA TGCCAGAAAG
CAACGCTAA
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| Protein sequence | MTQPSSPEKV SQSTLIREWN PEDTKFWQSG GQRIAQRNLW ISVPCLLLSF CVWMIFSTVA
VNLNKVGFRF TTDQLFLLTA LPSVSGALLR VPYSFVIPLV GGRRWTTLST FILIIPCIWL
GFAVQDPHTP YNIFVTISLL CGFAGANFAS SMANISFFFP KSRQGSALGI NGGLGNLGVS
VMQLLVPVVI FLPILGFSGN GVAQPDGHQI WLHHAAWMWV PFLVIAATAA WFGMNDLPAP
NASIRKQLPV LKQMHLWVLS FLYLSTFGSF IGFSAGFGML SRTQFPDIVI LYYAFFGPLL
GALARPVGGM LSDRFGGVKV TLINFILMAI FSVLLFLSLP SANSAGSFEM FFGIFMMLFL
TAGLGSGSTF QMIAVIFRKL TADRVKSQGG SDADAQSTAA TDTAAALGFI SAIGAIGGFF
IPQAFGMSLE LTGSPTGAMK VFVVCYVVCI LVTWLFYARK QR
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