| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2234 |
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| Symbol | |
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| ID | 8133178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2566316 |
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| End bp | 2567809 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865521 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003017808 |
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| Protein GI | 253688618 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCTCAC TTCTGACCGA CTTATTGCTT CAGCGTTTAG CCAACCAGCA AGACGGTGCG
CTAAACAAGC GTTTGTACGA CTGCATTCGG CTAGCGATTC TTGATGGCGC GATTGCCGCT
GGCGAGCGTC TGCCGTCGTC GCGCGATCTG GCGCAGCAGC TATCACTGTC ACGTAATACC
GTACTGACCG CTTACGAACA GCTCCTGGCA GAAGGCTATA TTGATGCGCG CAAAGGAAGC
GGGACATTCG TCACGGAACA GTTGCCCGAT GGCAATATGC AACCGGTGAG CAGCGACAGC
GCCGGAGAAA TCCGTGAACC TAAACATGAA TTATCGCGTC GCGGTATGCA TCTGCTGGGT
TATGCCGGTG CCTCTGCCCG CCAATGGGGC GCGTTTATGC CGGGCATCCC GGATATCGCC
AGCTTTCCTC ACGATTTGTG GCGACGGATT CAGACGCGAC TGACGCGCCG CGTTCGTCCC
GAACAGCTTT CCTATTCACC GATTGGTGGC TGTCCCGAAC TGCAACTCGC TCTGGTGGAT
TATCTGCGCG TCGCCCGCTC TGTCGAATGC ACGCCGGAGC AAATTCTGAT TACCGAAGGC
ACGCATCAGG CGATGGATCT GCTGGCTAAA ATGCTGTGCA ACCCCGGCGA TTTGGCATGG
ATTGAAGATC CCTGTTACTG GGGGATTCGC AATGTTCTGA CGATTAACGG CCTGCGAGTC
GCCCCCGTTG ATGTCGATGA ACAAGGGCTG GCACCGCCGG AAACGCTGGC GCCCGACGCC
GTTCCACGCC TGATTTGCGT GACACCGTCA CATCAATATC CGTTGGGCGC GGTGATGAGT
CTGGCACGGC GTCAACGTCT GCTGGCACTG GCGCAGGAGC ACGGTTGTTG GGTGGTGGAG
GATGATTACG ATAGCGAATT CCGCTTCTCC GGCAGCCCGA TCCCCGCGCT GCAAGGGCTA
CAGGCGCAAT CACCGGTGAT CTACATCGGC ACATTCAGCA AAACACTCTA CCCCGGTCTG
CGTGTCAGCT ACATGGTGCT GCCTCCGCTG CTGGCGCAGT CGCTAAAGAC CGCACATTCC
GAGCTCTATC GCGGCGGTCA CTGGCTCACT CAAGCGACGC TCGCGCAGTT TATCCACGAA
GGCCACTACG CCGCACATAT CCGCCGTATG CGCCTGCTCT ACGCCCGACG CCGCGCGCTA
TTGACGTCGT TGATTGAACA ACATCTGGGC GCGGATTACG TTGGAGACAA CAGCAACGCC
GGGCTGCATA TGCTGCTCAG CCTGCCTCCT CATATCGACG ATGTCGTGCT AAGCGCGGCA
ATCTTGCGCC GTGGCGTGAT GGTTAAACCC CTCTCCAGCT ACTACCTGCA ACCGACGCAA
CAGCGTGGTT TATTACTGGG CTACGCCAGC GTGGAAGAGA GCCAAATGAC GAAGGCGTTT
TCCGTGATTG TGGCCTGTAT TCAGGCGCTG AATACGCGCC ATTCCGACGT CTGA
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| Protein sequence | MRSLLTDLLL QRLANQQDGA LNKRLYDCIR LAILDGAIAA GERLPSSRDL AQQLSLSRNT
VLTAYEQLLA EGYIDARKGS GTFVTEQLPD GNMQPVSSDS AGEIREPKHE LSRRGMHLLG
YAGASARQWG AFMPGIPDIA SFPHDLWRRI QTRLTRRVRP EQLSYSPIGG CPELQLALVD
YLRVARSVEC TPEQILITEG THQAMDLLAK MLCNPGDLAW IEDPCYWGIR NVLTINGLRV
APVDVDEQGL APPETLAPDA VPRLICVTPS HQYPLGAVMS LARRQRLLAL AQEHGCWVVE
DDYDSEFRFS GSPIPALQGL QAQSPVIYIG TFSKTLYPGL RVSYMVLPPL LAQSLKTAHS
ELYRGGHWLT QATLAQFIHE GHYAAHIRRM RLLYARRRAL LTSLIEQHLG ADYVGDNSNA
GLHMLLSLPP HIDDVVLSAA ILRRGVMVKP LSSYYLQPTQ QRGLLLGYAS VEESQMTKAF
SVIVACIQAL NTRHSDV
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