| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2233 |
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| Symbol | |
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| ID | 8133177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2564897 |
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| End bp | 2566162 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865520 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_003017807 |
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| Protein GI | 253688617 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.4744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAATA GCGAACTGAA TCAACGCCGT CTGGCCGCCA CGCCGCGTGG TGTGGGCGTC
ATGTGTGATT TCTATGCTGA GCGTGCGGAA AACAGCACCC TGTGGGATGT TGAAGGTCGA
GAATTTATCG ATTTCGCCGC CGGGATTGCG GTACTGAACA CCGGCCACCG CCATCCGAAA
ATTGTCACCG CGGTGCGTGA GCAACTGGAT TGCTTTACCC ATACGGCGTA CCAGATTGTG
CCTTACGGCA GCTACGTCAC CCTTGCCGAA CGCATCAATG CGCTGGCGCC GATTGAAGGC
GCGGCAAAGA CTACGTTCTT TACCACCGGA GCCGAAGCGG TGGAAAACGC GGTGAAAATT
GCTCGCGCCT ACACCAAACG CCCCGGTGTG ATTGCCTTCA ACGCCGCGTT TCACGGCCGC
ACGCTGCTGA CCATGACGCT AACGGGCAAA GTGGCACCGT ACTCCACAGG ATTCGGGCCG
TTCCCCGGCT CCATTTTCCA CGCGCTTTAC CCCAGTGAAC AGCACGGCAT TACCGTTGAG
CAGGCGTTGG AAAGCGTTGA ACGTCTGATG CATACCGATA TCGCCGCCGA TCAGGTTGCC
GCCATTCTGC TGGAGCCAGT GCAAGGCGAA GGTGGTTTCA ACGTCGCACC ACCGGCCTTT
ATTAGCGGGC TACGTAAACT GTGCGATGAG CATGGCATCC TGCTGATTGC TGATGAAGTG
CAGACGGGCT TTGCCCGTAC CGGCAAGCTG TTCGCGATGG AATATTACGC GGAGAAAGCG
GATCTGATCA CGATGGCAAA AAGTCTGGGC GGCGGTTTCC CGATCTCCGG CGTTGTCGGT
CGTGCTGACG TCATGGACGC ACCTGCGCCG GGCGGACTGG GTGGCACCTA TGCGGGTAAC
CCGCTGTCGG TGGCCTCCGC GCTGGCGGTA TTGGACGTGA TTGAAGAAGA GAAATTGTGC
CAGCGGGCAC AGCGTCTGGG TGCCGCGCTG GTGGAAACGC TGGAGAAAAT CAAAGCGCAG
TGTCCGGCAC TGGTGGCGAT TCGTGCGCAG GGGTCGATGG TAGCGGCGGA ATTTAACGAT
CCGCACACCG GAAAACCGTC GGCGGAGGTG ACCCGTCAAT TTCAGAAAAG TGCGTTGGAA
GCCGGTCTGC TGCTGCTGAC CTGCGGTGTA CATGGCAACG TGATTCGTTT CCTGTATCCG
TTAACGGTAC CTGACGATCA GTTCAGTAAG GCCATGAGCA TCCTGACGCG CGTATTTACA
CGATAG
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| Protein sequence | MKNSELNQRR LAATPRGVGV MCDFYAERAE NSTLWDVEGR EFIDFAAGIA VLNTGHRHPK
IVTAVREQLD CFTHTAYQIV PYGSYVTLAE RINALAPIEG AAKTTFFTTG AEAVENAVKI
ARAYTKRPGV IAFNAAFHGR TLLTMTLTGK VAPYSTGFGP FPGSIFHALY PSEQHGITVE
QALESVERLM HTDIAADQVA AILLEPVQGE GGFNVAPPAF ISGLRKLCDE HGILLIADEV
QTGFARTGKL FAMEYYAEKA DLITMAKSLG GGFPISGVVG RADVMDAPAP GGLGGTYAGN
PLSVASALAV LDVIEEEKLC QRAQRLGAAL VETLEKIKAQ CPALVAIRAQ GSMVAAEFND
PHTGKPSAEV TRQFQKSALE AGLLLLTCGV HGNVIRFLYP LTVPDDQFSK AMSILTRVFT
R
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