Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2203 |
Symbol | |
ID | 8133147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2532249 |
End bp | 2533829 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865491 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003017778 |
Protein GI | 253688588 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTTGC AGGGTTTCCT GTCCATCTTC TGGAATGTTG AGACGCCGTA TCGCGCTACC TGCACGGCGG GTGGCTGCAC AAGTGTCTTA ATTCAAAATA AGGAGATGGC AATGATGTTC ACCCAACCGT TTCGTTCCGA TGAAAAAACC AAGGCTCCCG AGCTGGAACT GGTGGATTTT GCATTTGGTC GCATCAAGGA CGCGATTTAT ATCGTCAATG AAGATCAGCG TTTTTGTTAT GTCAATGAAG CCGCCAGCCA GACACTGGGT TACAGCATTA CGGAATTCAT GCATCTGAGC GTTGTCGACA TCGACCCGCT ATGGAGCGCC GATCATCGGT CACCGGACTG GCTGCAGGAG TACGAATCAG GCGTGGGTAC CACGTTTGAA ACCCAGCACC TCACCCGCTA CGGCATGACT ATTCCGGTAG AAGTTAATCT CACACATTTC CAACACAGAG GACGTAGCTA CAGCATGTGT GTCGTCAGAG ATATCAGGGA ACGTAAACAT ATTGAACAGT TAGCCTATGC GCGAGAGCAG GAATTTCGCG CGCTGGTTGA GAACACGCCG GATTTGATTA TTCGCTTCGA TCCCAACCTG AATTGCCTGT ACGCCAACGC GGCCAGTTTG AAACATCTGG ATTTCACCGT AGAGCAACTT CGGGGCCGTA TGATTACGGA GTTAATGCCC GGTGTTGGGT GTGCAATCCG TATGGAACAA CTGGTGCAGC AGGTGGTTGA TACCCGCAGC AGCGCGGAAG GTGAAGTGAT GGAGTCGCGG GGGAAAGGCG ATCAGCGCCA TCAAAGTATT CACCATATTC GCTGTGTGCC GGAGTTTGAT CAGCATGGCG CGCTGGTGTC GATTCTAACC GTAGGACGGG ACATTACCGC GATTCGCTAT GCGGAGAAAA AACTGGCTGA TTCGCATATG CAACTGCGTT TGCTGGCACG CCAGCGCGAG ATTTCGCGTG AGGAAGAACG TAAGCATATC GCGCAGGAAA TTCACGATGA GCTGGGGCAG CATTTGACCA CGATCCGCAT GAGCCTGTCG CTGATGCGCA TGTGTTTTGC CAAGGAAAAC CCTGACATGC AGGCGCATTT GCAAAAGCTG ATGCAGTTGG CTGACCAAAC GATTCAGGTG GTGCGTAACG TGTCGACCCG GCTTAGACCG AATGTGTTGA ATATGGGGCT TACACCTGCG CTGGAATGGC TGTGCGACGA ATTTAACCGG CACTACAGCG CCACCTGTCT GCTACGAACC TTGGGGGAAC CGCTGGCGCT CAATGACGAA AGCACCACGG CGGCATTCCG CGTCGTGCAG GAATCGTTGA CTAACGTCGC GCGCTACGCC GCCGCTACCC AGGTACGCAT TACGCTGGAT CATCAGCCTG ACTGTGTGGT GCTGTGCATC AAAGACAACG GCAAAGGTTT TGATTCCCAA GCTAAAAATA AAAACGCTTT CGGGCTCATG AGTATGAAAG AGCGAGGGCG GATGCTGGGG GGCGAAGTCG TGATTGAAAG TGAGCCCGGT AAAGGCACGC TGGTGCAGTT AACGTTTCCT AAAAATGGTG ATACCCGTTA A
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Protein sequence | MPLQGFLSIF WNVETPYRAT CTAGGCTSVL IQNKEMAMMF TQPFRSDEKT KAPELELVDF AFGRIKDAIY IVNEDQRFCY VNEAASQTLG YSITEFMHLS VVDIDPLWSA DHRSPDWLQE YESGVGTTFE TQHLTRYGMT IPVEVNLTHF QHRGRSYSMC VVRDIRERKH IEQLAYAREQ EFRALVENTP DLIIRFDPNL NCLYANAASL KHLDFTVEQL RGRMITELMP GVGCAIRMEQ LVQQVVDTRS SAEGEVMESR GKGDQRHQSI HHIRCVPEFD QHGALVSILT VGRDITAIRY AEKKLADSHM QLRLLARQRE ISREEERKHI AQEIHDELGQ HLTTIRMSLS LMRMCFAKEN PDMQAHLQKL MQLADQTIQV VRNVSTRLRP NVLNMGLTPA LEWLCDEFNR HYSATCLLRT LGEPLALNDE STTAAFRVVQ ESLTNVARYA AATQVRITLD HQPDCVVLCI KDNGKGFDSQ AKNKNAFGLM SMKERGRMLG GEVVIESEPG KGTLVQLTFP KNGDTR
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