| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2184 |
|---|
| Symbol | |
|---|
| ID | 8133128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2514590 |
|---|
| End bp | 2514856 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644865472 |
|---|
| Product | PAAR repeat-containing protein |
|---|
| Protein accession | YP_003017759 |
|---|
| Protein GI | 253688569 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4104] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.062242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAACG CAGTTAAATT AGGCGATAGC GATACCGGTC ACGGTAGTCA TCCGCCGACG
CCCGTCGCGG TGGGGTCATC GACGGTTAAG GTTGATGGTA TGCCGTTGGC TCGACAAGGC
GATCCTTTGG TTCCCCACGG TCATGCTCGG AGCATTAGCG GTGGTTCATC GAGTGTATTT
ATTGATAGTA AACCCGCGGC ACGAACGGGG GATGGTGTGA GCTGTGGTGG CGTGGTGATT
GGTGGGGGAA CAGTCACCAT TGGGTGA
|
|---|
| Protein sequence | MGNAVKLGDS DTGHGSHPPT PVAVGSSTVK VDGMPLARQG DPLVPHGHAR SISGGSSSVF
IDSKPAARTG DGVSCGGVVI GGGTVTIG
|
|---|
| |