| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2153 |
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| Symbol | |
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| ID | 8133097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2461098 |
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| End bp | 2462042 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865441 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003017728 |
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| Protein GI | 253688538 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.280897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAT CTCTACATAC GTCTTCTCAG CAAGCACCGC TAAGCCAGGC GCAGGACGCG
CCGTTGCGCA TCGTTCCTGC GCGTTATCCT TTTCGTTTTG CCGGCGCGCT GTTTTCGCTG
TTTATTTTTG CCGCGATTAT TCAGTCAATT GCGCTGAATC CGCGCTGGGA ATGGTCGGTG
TTTGCCGAGT GGTTTTTTAA TCCGGTTATT CTCACCGGTC TGGGGCAAAC GCTGCTGCTG
ACCGCACTTG GCACATTATT CAGCATTGTT TTCGGCACCG CACTAGCGCT GGCTCGACTT
TCGCCGTCTT ATCTGCTGTC CACTCTGTCG TGGCTGTATA TCTGGCTATT CCGGTCACTG
CCACTGATTC TGGTGCTGAT TATTCTCTAC AATTTCTCGT ATCTCTATGA CGAGCTGGCG
CTCGGGATTC CCTTCACTTC CGTTGTCTTT CTGCGCTACC CGACGATTGA TTTGCTGGAT
CAATTTTCCG TCGCCGTGCT TGGCCTGACG CTGGTGCAGT CCGCCTATAC AGCGGAAATT
ATTCGCGGCG GGATTCTTGG TGTAGATGCT GGCCAGTTTG AAGCCTCGGC CGCACTCGGC
CTACCCGGCG GTCGCCGGAC AGTACGCATA ATTCTGCCAC AGGCGCTGCG CTCCATTCTG
CCCACCGGTT TCAACGAGAT CATCAGTTTG GCGAAAGGTA CGTCGATCGT TTATGTGCTG
GCACTGCCGG AGCTGTTCTA TACCGTTCAG GTCATCTACA ACCGTACGCA GCAAGTTATC
CCGCTGCTGA TGGTCGCCAC CATCTGGTAT CTGCTGATCA CCACGGTGCT ATCCGTCATC
CAATACTACG TGGAACGCTA TGTGTCTCGC GGTGCCGTGC GTGAAATGCC GCCGACGCCG
CGCCAGAGAC TCGTCCGTAT CCTGACGCGC AAGCGCGCAC GTTAA
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| Protein sequence | MTQSLHTSSQ QAPLSQAQDA PLRIVPARYP FRFAGALFSL FIFAAIIQSI ALNPRWEWSV
FAEWFFNPVI LTGLGQTLLL TALGTLFSIV FGTALALARL SPSYLLSTLS WLYIWLFRSL
PLILVLIILY NFSYLYDELA LGIPFTSVVF LRYPTIDLLD QFSVAVLGLT LVQSAYTAEI
IRGGILGVDA GQFEASAALG LPGGRRTVRI ILPQALRSIL PTGFNEIISL AKGTSIVYVL
ALPELFYTVQ VIYNRTQQVI PLLMVATIWY LLITTVLSVI QYYVERYVSR GAVREMPPTP
RQRLVRILTR KRAR
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