Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2121 |
Symbol | |
ID | 8133065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2425013 |
End bp | 2426104 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644865410 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_003017697 |
Protein GI | 253688507 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0490059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTCA AATGCGGTAT CGTTGGGCTG CCTAACGTCG GTAAATCCAC TCTGTTCAAT GCGTTGACCA AAGCCGGCAT CGAAGCGGCC AACTTCCCGT TTTGTACCAT CGAGCCAAAT ACTGGCGTCG TGCCGATGCC CGATCCACGT CTGGACAAAC TGGCCGAAAT CGTTAAGCCA CAGCGTATCC TCCCTACCAC CATGGAATTT GTTGATATCG CCGGTCTGGT AAAAGGCGCG TCTAAAGGTG AAGGTTTGGG TAACCAGTTC CTGACCAACA TCCGTGAGAC GGAAGCTATT GGCCACGTTG TGCGTTGCTT CGAAAATGAC AATATCATCC ACGTAAACAA CAAAGTTGAC CCAGCGGATG ACATCGACGT GATCAACACT GAGCTGGCGT TGTCTGACCT CGATACCTGT GAACGCGCCA TTCATCGCGT GCAGAAAAGA GCCAAAGGCG GCGATAAAGA TGCTAAAGCT GAGTTGGCTG CGCTGGAGAA ATGCTTACCG CAGTTGGAGA ACGCCGGTAT GCTGCGCTCG CTGGATTTAA GCGATGAAGA CAAAGCAGCG ATCAAATACC TGAGCTTCCT GACGCTGAAA CCAACCATGT ACATCGCCAA CGTCAACGAA GACGGTTTCG AAAATAACCC GTACCTCGAT AAAGTGCGCG AAATCGCTGC CGCTGAAGGT TCTGTCGTCG TGGCAGTCTG TGCCGCCGTT GAATCAGATA TTGCGGAATT GGATGACGCT GACCGTGAAG AGTTTATGGC TGAGTTAGGT CTGGAAGAAC CTGGCCTGAA CCGTGTTATC CGTGCAGGCT ATGAACTGCT GAACCTGCAA ACCTACTTCA CCGCGGGCGT GAAAGAAGTT CGAGCATGGA CCATCCCTGT CGGCGCCACT GCCCCACAGG CAGCAGGTAA AATTCATACC GACTTCGAGA AAGGCTTCAT CCGTGCGCAA ACCATCGCCT ATGAAGATTT CATCACCTAC AAAGGCGAAC AAGGCGCGAA AGAAGCCGGA AAAATGCGTT CAGAAGGCAA GGACTACATC GTAAAAGATG GCGACGTCAT GAACTTCCTG TTCAACGTCT AA
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Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPMPDPR LDKLAEIVKP QRILPTTMEF VDIAGLVKGA SKGEGLGNQF LTNIRETEAI GHVVRCFEND NIIHVNNKVD PADDIDVINT ELALSDLDTC ERAIHRVQKR AKGGDKDAKA ELAALEKCLP QLENAGMLRS LDLSDEDKAA IKYLSFLTLK PTMYIANVNE DGFENNPYLD KVREIAAAEG SVVVAVCAAV ESDIAELDDA DREEFMAELG LEEPGLNRVI RAGYELLNLQ TYFTAGVKEV RAWTIPVGAT APQAAGKIHT DFEKGFIRAQ TIAYEDFITY KGEQGAKEAG KMRSEGKDYI VKDGDVMNFL FNV
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