| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2116 |
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| Symbol | lolB |
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| ID | 8133060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2420950 |
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| End bp | 2421573 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865405 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_003017692 |
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| Protein GI | 253688502 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.454723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACCA ATACCGTCCG ATGCCTGCGT TTACTGCCTT TAGCCAGCGT ATTGCTAGCC
GCCTGTAGCG TTCATCAACC CACCCAAACG GGTAAAAGCC CCATTTCGCC AGAGTGGCAA
CAGCATCAGC AAAAAGTACA GCAACTCAGC CAATATCAAA CTCGCGGCGC TTTTGCCTAT
ATCTCCGATA GCAAAAGAGT ATCAGCCAAT TTTTTCTGGC AGGACACACC GCCGCAGCGT
TATCGACTGC TGCTGACCAA CCCGCTCGGC AGCACCGAAT TAGAGCTGCG CGCCCAGCCT
GACGGCGTAC AGATCACCGA TAATCAAGGC AAACGTTACG TGGGGAAAGA TGCTGAATAC
ATGATTCAGC AGCTCACCGG CATGGCGATC CCGCTGAACA ATCTGCGTCA GTGGATCCTC
GGTATCCCAG GCGACGCCAC CGAATTCACG CTGGATGAAC GCTATCTGCT GAAAACCGTC
ACCTACCGTC AGGGTAACCA AAACTGGAAT GTCAGCTATC AAAGCTACAA CACCGAGCTG
ACGCCGCCGC TCCCAACCAG TCTGGAGCTG GTTCAGGGCG AACAGCGTAT TAAGCTGAAA
ATGAATAACT GGATGGTTAA ATAA
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| Protein sequence | MPTNTVRCLR LLPLASVLLA ACSVHQPTQT GKSPISPEWQ QHQQKVQQLS QYQTRGAFAY
ISDSKRVSAN FFWQDTPPQR YRLLLTNPLG STELELRAQP DGVQITDNQG KRYVGKDAEY
MIQQLTGMAI PLNNLRQWIL GIPGDATEFT LDERYLLKTV TYRQGNQNWN VSYQSYNTEL
TPPLPTSLEL VQGEQRIKLK MNNWMVK
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