Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2108 |
Symbol | pntA |
ID | 8133052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2412177 |
End bp | 2413706 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865397 |
Product | NAD(P) transhydrogenase subunit alpha |
Protein accession | YP_003017684 |
Protein GI | 253688494 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.096772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTG GTGTACCAAG AGAGCGGTTG GCCAATGAAG CCCGTGTAGC AGCGACGCCG AAAACGGTTG AACAGCTGTT GAAACTGGGT TTTACGGTCT CGATAGAACG TGAAGCGGGA AAACTGGCAA GTTTTGACGA TGCGGCATAT GAAGAAGCTG GCGCGTCGAT TGTTGATAGT TCGGAAGTCT GGCAATCCGA TATCGTCCTG AAGGTGAATG CGCCGCAGGA TGACGAAATC GAGCTGACCC GTGCGGGCAG TACGGTTGTC AGCTTTATCT GGCCCGCGCA AAACCCGGCA CTGCTGGAAA AACTGGCAGC CCGTCAGGTG ACGGTAATGG CCATGGATTC CGTGCCACGT ATTTCACGCG CGCAGTCACT CGATGCGCTC AGCTCGATGG CCAACATTGC TGGCTATCGC GCTATTGTTG AAGCAGCCCA CGAGTTTGGT CGCTTCTTTA CCGGGCAAAT TACCGCTGCA GGTAAAGTTC CGCCTGCCAA AGTGATGATT ATCGGCGCAG GTGTAGCCGG TTTGGCCGCG ATCGGCGCAG CAGGTAGCTT AGGTGCTATC GTTCGTGCTT TTGATACCCG CCCTGAAGTA AAAGAGCAGG TTAAGAGCAT GGGTGCCGAG TTCCTCGAAC TCGACTTTGA AGAAGAAGCG GGCAGCGGTG ACGGCTATGC CAAGGTCATG TCTGAAGCCT TTATCAAAGC CGAAATGGAA CTGTTTGCTG CACAGGCGAA AGAAGTCGAC ATTATCGTCA CTACCGCACT GATTCCCGGA AAACCGGCAC CGCGACTGAT CACCAAAGAA ATGGTGCTGA GCATGAAGCC CGGCAGCGTG ATTGTTGATT TAGCCGCGCA AACGGGCGGA AACTGCGAAC TGACCGTGGC CGATCGCGTC ACCGTGACGG AAAACGGCGT CAAAATTATC GGTTATACCG ATTTACCCAG CCGTCTGCCG ACGCAATCCT CACAGCTTTA CGGCACAAAC CTGGTTAACC TGCTGAAATT GCTCTGCAAA GAGAAAAACG GCGAAATCGA CGTCGATTTT GACGATACCG TGATTCGCGG CGTGACCGTC ATTAAAGAGG GTGAAATCAC CTGGCCGGCA CCGCCAATTC AAGTATCAGC GCAGCCACAG CAGGCAAAAC CTGCCGCTGC CGTGGTGAAG GAAGAAGCCA AACCGACATC GCCGTGGAAG AAATACGCGT TCCTCGCGAT TGCTATTCTG CTGTTTGGCT GGCTGGCTGA TGCCGCACCG AAAGAGTTCC TGTCTCACTT TACCGTTTTT GCGCTGTCCT GCGTGGTGGG GTACTACGTG GTCTGGAATG TCAGTCACGC ATTGCACACG CCATTGATGT CAGTCACTAA CGCGATATCA GGCATTATCG TTGTCGGAGC ATTGTTGCAG ATCGGCCACG GCGGATGGGT GTCGTTCTTC TCATTCATTG CCGTACTGAT CGCCAGCATC AATATTTTCG GTGGTTTCAC CGTGACTCAG CGCATGCTGA AAATGTTCCG TAAAAACTAA
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Protein sequence | MRIGVPRERL ANEARVAATP KTVEQLLKLG FTVSIEREAG KLASFDDAAY EEAGASIVDS SEVWQSDIVL KVNAPQDDEI ELTRAGSTVV SFIWPAQNPA LLEKLAARQV TVMAMDSVPR ISRAQSLDAL SSMANIAGYR AIVEAAHEFG RFFTGQITAA GKVPPAKVMI IGAGVAGLAA IGAAGSLGAI VRAFDTRPEV KEQVKSMGAE FLELDFEEEA GSGDGYAKVM SEAFIKAEME LFAAQAKEVD IIVTTALIPG KPAPRLITKE MVLSMKPGSV IVDLAAQTGG NCELTVADRV TVTENGVKII GYTDLPSRLP TQSSQLYGTN LVNLLKLLCK EKNGEIDVDF DDTVIRGVTV IKEGEITWPA PPIQVSAQPQ QAKPAAAVVK EEAKPTSPWK KYAFLAIAIL LFGWLADAAP KEFLSHFTVF ALSCVVGYYV VWNVSHALHT PLMSVTNAIS GIIVVGALLQ IGHGGWVSFF SFIAVLIASI NIFGGFTVTQ RMLKMFRKN
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