| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2031 |
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| Symbol | araH |
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| ID | 8132975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2333456 |
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| End bp | 2334442 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865321 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_003017608 |
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| Protein GI | 253688418 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.192716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAACGG TTACGTCTGC AACCTCAGAA AAGAAGACCG GCAGTTCGGG GTTGTCCCGT
ATCTGGGATA ACTACGGCAT GCTGGTGGTG TTTGCTGTGT TGTTTCTTGG CTGTGCGATT
TTCGTCCCGA ATTTCGCAAC GTTTATCAAT ATGAAAGGGT TGGGGCTAGC AATCTCCATG
TCCGGGATGG TGGCCTGCGG GATGCTGTTC TGTCTGGCAT CTGGCGATTT TGACCTGTCG
GTGGCCTCCA TCATCGCCTG CGCTGGGGTA GCCACGGCAG TGGTGATCAA TATCAGTGAA
AGCCTGTGGA TTGGTGTCAG TGCCGGGCTG TTGCTGGGCG TGGCGTTCGG TTTGCTCAAC
GGTTTTGTGA TTGCCCGTTT GAAGATCAAC GCGTTGATCA CCACGCTGGC GACGATGCAG
ATTGCGCGTG GTCTGGCGTA CATCATTTCC GATGGTAAAG CGGTAGGGAT TGAAGATGAG
CGCTTCTTCG CACTGGGTTA TGCCAACTGG CTGGGTTTGC CCGCGCCAAT CTGGATCACC
ATCGGCTGCA TGATTCTGTT TGGGCTGCTG CTGAACAAAA CCACATTTGG CCGCAATACG
CTGGCGATTG GGGGCAATGA AGAAGCGGCG CGTCTGGCTG GGGTGCCAGT GGTGCGTACC
AAGATCATCA TTTTCGCTTT GTCTGGCCTG GTGTCAGCCG CTGCGGGGAT CATTTTGGCC
TCGCGCATGA CCAGCGGCCA GCCGATGACC TCCATCGGGT ATGAGTTGAT CGTGATTTCT
GCCTGTGTGC TGGGTGGTGT GTCGCTGAAA GGTGGGATAG GTAAAATTTC TTACGTGGTG
GCCGGCGTAC TGATTTTGGG TACGGTGGAA AACGCGATGA ACCTGCTGAA CATCTCTCCA
TTTGCCCAGT ATGTGGTGCG CGGTCTGATT CTGCTGGCGG CGGTTATCTT CGACCGCTAC
AAACAGTTGG CGAAGAAAAC GGTGTAA
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| Protein sequence | MSTVTSATSE KKTGSSGLSR IWDNYGMLVV FAVLFLGCAI FVPNFATFIN MKGLGLAISM
SGMVACGMLF CLASGDFDLS VASIIACAGV ATAVVINISE SLWIGVSAGL LLGVAFGLLN
GFVIARLKIN ALITTLATMQ IARGLAYIIS DGKAVGIEDE RFFALGYANW LGLPAPIWIT
IGCMILFGLL LNKTTFGRNT LAIGGNEEAA RLAGVPVVRT KIIIFALSGL VSAAAGIILA
SRMTSGQPMT SIGYELIVIS ACVLGGVSLK GGIGKISYVV AGVLILGTVE NAMNLLNISP
FAQYVVRGLI LLAAVIFDRY KQLAKKTV
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