Gene PC1_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2021 
Symbol 
ID8132965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2321419 
End bp2322048 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content53% 
IMG OID644865311 
Productelectron transport complex protein RnfG 
Protein accessionYP_003017598 
Protein GI253688408 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID[TIGR01947] electron transport complex, RnfABCDGE type, G subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACAA CAATGCGTCG CCACGCGACA ACACTGGCCT TGTTTGCCGC CTTCACTACC 
GCAGTCACTG CCGTGGTGAA TATGCTGACG GAACCCACGA TCTCGCATCA GGCAATGTTG
CAGCAAAAGA TGCTGTTGGA TCAGGTAGTT CCGGCAGAGC TATACAACAG TGACATGCAA
AAAGAGTGTT ACGTTGTCAC TAATCCAGCG TTAGGATCGT CAGCGCCGCA CCGCGTGTTC
ATCGCCCGTC AGGACGGTGA ACCTGTTGCC GCAGCACTAG AAAGTACCGC GCCAGATGGC
TATTCTGGTG CTATTCGGCT GCTGGTTGGT GCCGATTTTC ATGGCAAGGT ACTCGGCGTT
CGTGTGACCG AGCATCATGA AACGCCGGGG CTGGGTGATA AAATCGAAGT ACGCATCTCT
GACTGGATCA CCCGATTCAG CGGACAAACG GTACAGAGCG AGCAAGATGC CCGCTGGGCA
GTGAAGAAAG AAGGCGGAAT GTTTGATCAA TTTACCGGGG CCACGATTAC GCCACGCGCC
GTCATTAATA GCGTAAAACG CAGCGCGCTT TACCTGCAAA CGTTGCCGTC ACAAATCAAC
ACGCTATCCG CCTGTGGAGA GAACCAATGA
 
Protein sequence
MITTMRRHAT TLALFAAFTT AVTAVVNMLT EPTISHQAML QQKMLLDQVV PAELYNSDMQ 
KECYVVTNPA LGSSAPHRVF IARQDGEPVA AALESTAPDG YSGAIRLLVG ADFHGKVLGV
RVTEHHETPG LGDKIEVRIS DWITRFSGQT VQSEQDARWA VKKEGGMFDQ FTGATITPRA
VINSVKRSAL YLQTLPSQIN TLSACGENQ