| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1985 |
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| Symbol | |
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| ID | 8132929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2281972 |
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| End bp | 2283609 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644865275 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003017562 |
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| Protein GI | 253688372 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACA TCACAACTAA AAAAAGAGTA GCGGCCGCTA TTATCGCGGC ATTGAGTAGC
ACGATGGCTG TTTCTGCTTT TGCCGCGACC ATTCCCGCTG GCGTGCAGTT AGCAGAAAAA
CAAGAGTTGG TTCGTAACAA CGGCGCTGAA GTTTCCTCCC TTGACCCGCA TAAAATCGAA
GGTGTGCCGG AATCCAACGT CTCGCGCGAT CTGCTGGAAG GACTGGTTAT TTCCGACGTT
AACGGCAAAA CCAGCCCGGG CGTAGCGGAA AGCTGGGATA ACAAAGATTT TAAAGTGTGG
ACATTCCACC TGCGTAAAGA TGCCAAATGG TCCAATGGTG AGCCAGTTAC CGCACAAGAT
TTCGTCTACA GCTGGCAGCG TCTGGCCGAT CCGAAAACTG CATCGCCTTA CGCCAGCTAT
CTGCAATACG GTCATCTGCT GAATATCGAT GACATCATCG CCGGCAAAAA ATCTCCGGAT
ACGCTGGGCG TGAAAGCGAT TGACGATCAT ACGTTTGAAG TCACGCTTTC TGAAGCCGTA
CCTTACTTCT ATAAACTGCC TGTTTATGTT GCGATGTCCC CAATCAATAA AGCCGTAGTT
GAAAAATTCG GTGAAAAATG GACGCAGCCG CAAAACTGGG TTGGTAATGG TGCCTACAAG
CTGAAAAGCT GGGTCGTGAA CGAAAAAATG GTGCTGGAGC GTAACCCGCA ATATTGGGAT
AACGCCCATA CTGTGATTAA TCAGGTGACG TATTTGCCGA TTGCGTCTGA AGTGACGGAC
GTTAACCGCT ACCGCAGCGG TGAAATCGAC ATGACGTACA ACAACCTGCC AATCGAACTC
TTCCAAAAGC TGAAGAAAGA AATCCCGGAT GAAGTGAAGG TTAACCCGTA TCTGTGTACT
TACTACTACG AAGTTAACAA CCAGAAGCCG CCGTTTAACG ATGTGCGCGT ACGTACTGCG
CTGCGTCTGG GTCTGAGCCA GGATATTCTG ACCAACAAGG TGAAAAATCA GGGCGATATT
CCTGCCTATG GCTTTGTACC ACCGTATATC GATGGCCTGA AAGCGTCAGT GCCAGAGTGG
TTCACTTGGC CACAGGCGAA ACGTAACGAA GAAGCGAAAA AACTGTTGGC AGAAGCGGGT
TATACCGCGG AAAAACCGCT GACGCTGAGC CTGCTGTACA ACACATCCGA TCTGCATAAG
AAGATGGCGA TCGCGGCTGC CTCTATCTGG AAACAGAATA TCGGTGTGGA TGTTAAGCTG
GAAAATCAGG AATGGAAAAC CTTCCTCAGC ACCCGTCATC AGGGGACCTA TGATGTTGCA
CGCGCCGGAT GGTGTGCGGA CTACAACGAA CCTTCAACTT TCCTAAACAG CATGCTGTCT
GACAGCAGCA GTAACACCTC GCACTATAAG AGCAAAGAGT TTGATGCACT GGTGGCGAAA
TCCCTGCAGG TGAAAACCGA CGAGGAGCGC GCCGCGATTT ATCAGCAGGC TGAATCACAG
CTGGATAAAG ACGCTGTCAC CATCCCAGTT TATTACTATG CGAATACCCG ACTGGTGAAA
CCTTATGTTG GTGGATTAAC GGGCAACGAT CCTCAGGATA ATGTTTACGT GAAAGATCTT
TATATCATCA AGCACTAA
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| Protein sequence | MTHITTKKRV AAAIIAALSS TMAVSAFAAT IPAGVQLAEK QELVRNNGAE VSSLDPHKIE
GVPESNVSRD LLEGLVISDV NGKTSPGVAE SWDNKDFKVW TFHLRKDAKW SNGEPVTAQD
FVYSWQRLAD PKTASPYASY LQYGHLLNID DIIAGKKSPD TLGVKAIDDH TFEVTLSEAV
PYFYKLPVYV AMSPINKAVV EKFGEKWTQP QNWVGNGAYK LKSWVVNEKM VLERNPQYWD
NAHTVINQVT YLPIASEVTD VNRYRSGEID MTYNNLPIEL FQKLKKEIPD EVKVNPYLCT
YYYEVNNQKP PFNDVRVRTA LRLGLSQDIL TNKVKNQGDI PAYGFVPPYI DGLKASVPEW
FTWPQAKRNE EAKKLLAEAG YTAEKPLTLS LLYNTSDLHK KMAIAAASIW KQNIGVDVKL
ENQEWKTFLS TRHQGTYDVA RAGWCADYNE PSTFLNSMLS DSSSNTSHYK SKEFDALVAK
SLQVKTDEER AAIYQQAESQ LDKDAVTIPV YYYANTRLVK PYVGGLTGND PQDNVYVKDL
YIIKH
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