Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1981 |
Symbol | |
ID | 8132925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2274687 |
End bp | 2275094 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644865271 |
Product | global DNA-binding transcriptional dual regulator H-NS |
Protein accession | YP_003017558 |
Protein GI | 253688368 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.295466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG CACTAAAGAT TCTTAACAAC ATCCGTACTC TGCGTGCCCA GGCAAGAGAA TGTACCCTGG ATACTTTGGA AGAAATGCTG GAAAAACTGG AAGTCGTGGT TAATGAACGC CGCGAAGAAG ATAGCCAGGT TCAGGCTGAA GTTGAAGAAC GTGCGCGTAA ATTGCAGCAA TATCGCGATA TGCTGATTGC CGACGGTATT GACCCTAACG AATTATTACA GTCTTTAGGT TCAGTGAAAG TTGCAGGTAA AAGCAAACGC GCTGCCCGTC CGGCAAAATA TCAATACACT GACGAAAACG GCGAAGTTAA AACCTGGACT GGCCAGGGTC GTACACCGGC AGTAATCAAG AAAGCAATCG AAGAGCAAGG TAAATCTTTA GACGATTTCC TGCTGTAA
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Protein sequence | MSEALKILNN IRTLRAQARE CTLDTLEEML EKLEVVVNER REEDSQVQAE VEERARKLQQ YRDMLIADGI DPNELLQSLG SVKVAGKSKR AARPAKYQYT DENGEVKTWT GQGRTPAVIK KAIEEQGKSL DDFLL
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