Gene PC1_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1981 
Symbol 
ID8132925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2274687 
End bp2275094 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content46% 
IMG OID644865271 
Productglobal DNA-binding transcriptional dual regulator H-NS 
Protein accessionYP_003017558 
Protein GI253688368 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.295466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG CACTAAAGAT TCTTAACAAC ATCCGTACTC TGCGTGCCCA GGCAAGAGAA 
TGTACCCTGG ATACTTTGGA AGAAATGCTG GAAAAACTGG AAGTCGTGGT TAATGAACGC
CGCGAAGAAG ATAGCCAGGT TCAGGCTGAA GTTGAAGAAC GTGCGCGTAA ATTGCAGCAA
TATCGCGATA TGCTGATTGC CGACGGTATT GACCCTAACG AATTATTACA GTCTTTAGGT
TCAGTGAAAG TTGCAGGTAA AAGCAAACGC GCTGCCCGTC CGGCAAAATA TCAATACACT
GACGAAAACG GCGAAGTTAA AACCTGGACT GGCCAGGGTC GTACACCGGC AGTAATCAAG
AAAGCAATCG AAGAGCAAGG TAAATCTTTA GACGATTTCC TGCTGTAA
 
Protein sequence
MSEALKILNN IRTLRAQARE CTLDTLEEML EKLEVVVNER REEDSQVQAE VEERARKLQQ 
YRDMLIADGI DPNELLQSLG SVKVAGKSKR AARPAKYQYT DENGEVKTWT GQGRTPAVIK
KAIEEQGKSL DDFLL