Gene PC1_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1975 
Symbol 
ID8132918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2268608 
End bp2269234 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content51% 
IMG OID644865264 
Producthypothetical protein 
Protein accessionYP_003017552 
Protein GI253688362 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGACTT ACATCTATCT GATCGCGATT ACGGCAGAGG GGATGTCCGG GGCGCTGGCC 
GCTGGACGTC GTAATATGGA TATTTTTGGC GTAGGCATGA TTGCCTTTAT CACCGCGCTT 
GGCGGTGGCA CCGTTCGCGA TATTCTCCTC GGTAATTATC CCATCGGCTG GACGCAGCAT 
CCCGGCTATA TCTACCTCAC CATTGGTGCG GGTCTTTTCA CAATTATCAT TGCACGCTTT 
ATGCACCATT TGCATCGCCT CTTTCTGGTT CTTGATGCGA TGGGGCTCAT CGCCTTCACC 
ATTATTGGCT GCAATGTGGC GTTGGAGCTG AATTATTCGA TGACGGTGGT GGTCATGGCG 
GGCATCGTAA CCGGGATTTT TGGTGGAATA TTGCGTGATA TTTTCTGCAA CCGCACACCA 
ATGGTATTGA AGAAAGAGCT GTACGCCAGT GTCTCGCTTT TAGTCGCACT TTTATATTTG 
GGGCTCAAGT CGCTTAACAT CAACCACGAT ATTAACCTGC TGGTGTCATT CACTATTGGT 
TTGGCGGTGC GTCTGGCCGC AATTCGCTGG TCATGGCAAC TCCCAGTGTT CTCTTATGTT 
CCTGGGCGCT GGAAAGGCAA AGCGTAA
 
Protein sequence
MLTYIYLIAI TAEGMSGALA AGRRNMDIFG VGMIAFITAL GGGTVRDILL GNYPIGWTQH 
PGYIYLTIGA GLFTIIIARF MHHLHRLFLV LDAMGLIAFT IIGCNVALEL NYSMTVVVMA 
GIVTGIFGGI LRDIFCNRTP MVLKKELYAS VSLLVALLYL GLKSLNINHD INLLVSFTIG 
LAVRLAAIRW SWQLPVFSYV PGRWKGKA