Gene PC1_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1974 
Symbol 
ID8132917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2267378 
End bp2268196 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content53% 
IMG OID644865263 
Productexonuclease III 
Protein accessionYP_003017551 
Protein GI253688361 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.755106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGA ACATGAAAGT TGTATCTTTT AATATCAATG GCCTGCGGGC GCGCCCTCAT 
CAGTTGGCCG CCATTATCGA ACAACACCAG CCAGATGTGA TCGGGTTGCA GGAAACAAAA
GTCCACGATG ACATGTTTCC GTTAGAGGAT GTCAGCCAGT ACGGCTACCA CGTTTATTAT
CATGGGCAAA AGGGGCACTA CGGCGTCGCC CTGCTGTGTA AAGCGCAGCC GATTGCGGTG
CGTCGTGGTT TCCCAACGGA TGAAGACGAT GCGCAGCGCC GGATCATTAT GGCGGATTTC
GCCACTGAAC ATGGCACCTT CACGATCGTT AACGGGTATT TTCCACAGGG AGAAAGCCGC
GACCATCCAG TGAAATTCCC CGCGAAGACG CGTTTCTATC AGGATTTGCA AACCTATCTG
GAACAGCACC ACAGCGCCAC ACAACCGCTG ATCGTGATGG GCGATGTCAA TATCAGCCCC
ACCGACCTGG ATATCGGCAT TGGTGAAGAG AATCGCAAGC GCTGGTTACG CACGGGTAAA
TGTTCTTTCC TACCGGAAGA ACGTGAATGG ATGGCGCGTT TGCAAGGCTG GGGACTGATT
GACACTTTCC GTGCCGCCAA CCCAGAGAGC AACGATCGTT TTTCGTGGTT TGATTACCGC
TCAGCCGGGT TCGATGACAA CCGCGGCCTG CGTATCGACC TGATTCTCGC CAGCAACTTC
CTGGCCGACC GCTGTGTTGC TACCGGTATT GACTACGATA TTCGTGGAAT GGAAAAACCG
TCTGACCATG CGCCAATTTG GGCACAATTT GCGCTATAG
 
Protein sequence
MAANMKVVSF NINGLRARPH QLAAIIEQHQ PDVIGLQETK VHDDMFPLED VSQYGYHVYY 
HGQKGHYGVA LLCKAQPIAV RRGFPTDEDD AQRRIIMADF ATEHGTFTIV NGYFPQGESR
DHPVKFPAKT RFYQDLQTYL EQHHSATQPL IVMGDVNISP TDLDIGIGEE NRKRWLRTGK
CSFLPEEREW MARLQGWGLI DTFRAANPES NDRFSWFDYR SAGFDDNRGL RIDLILASNF
LADRCVATGI DYDIRGMEKP SDHAPIWAQF AL