Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1974 |
Symbol | |
ID | 8132917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2267378 |
End bp | 2268196 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865263 |
Product | exonuclease III |
Protein accession | YP_003017551 |
Protein GI | 253688361 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.755106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCGA ACATGAAAGT TGTATCTTTT AATATCAATG GCCTGCGGGC GCGCCCTCAT CAGTTGGCCG CCATTATCGA ACAACACCAG CCAGATGTGA TCGGGTTGCA GGAAACAAAA GTCCACGATG ACATGTTTCC GTTAGAGGAT GTCAGCCAGT ACGGCTACCA CGTTTATTAT CATGGGCAAA AGGGGCACTA CGGCGTCGCC CTGCTGTGTA AAGCGCAGCC GATTGCGGTG CGTCGTGGTT TCCCAACGGA TGAAGACGAT GCGCAGCGCC GGATCATTAT GGCGGATTTC GCCACTGAAC ATGGCACCTT CACGATCGTT AACGGGTATT TTCCACAGGG AGAAAGCCGC GACCATCCAG TGAAATTCCC CGCGAAGACG CGTTTCTATC AGGATTTGCA AACCTATCTG GAACAGCACC ACAGCGCCAC ACAACCGCTG ATCGTGATGG GCGATGTCAA TATCAGCCCC ACCGACCTGG ATATCGGCAT TGGTGAAGAG AATCGCAAGC GCTGGTTACG CACGGGTAAA TGTTCTTTCC TACCGGAAGA ACGTGAATGG ATGGCGCGTT TGCAAGGCTG GGGACTGATT GACACTTTCC GTGCCGCCAA CCCAGAGAGC AACGATCGTT TTTCGTGGTT TGATTACCGC TCAGCCGGGT TCGATGACAA CCGCGGCCTG CGTATCGACC TGATTCTCGC CAGCAACTTC CTGGCCGACC GCTGTGTTGC TACCGGTATT GACTACGATA TTCGTGGAAT GGAAAAACCG TCTGACCATG CGCCAATTTG GGCACAATTT GCGCTATAG
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Protein sequence | MAANMKVVSF NINGLRARPH QLAAIIEQHQ PDVIGLQETK VHDDMFPLED VSQYGYHVYY HGQKGHYGVA LLCKAQPIAV RRGFPTDEDD AQRRIIMADF ATEHGTFTIV NGYFPQGESR DHPVKFPAKT RFYQDLQTYL EQHHSATQPL IVMGDVNISP TDLDIGIGEE NRKRWLRTGK CSFLPEEREW MARLQGWGLI DTFRAANPES NDRFSWFDYR SAGFDDNRGL RIDLILASNF LADRCVATGI DYDIRGMEKP SDHAPIWAQF AL
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