| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1970 |
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| Symbol | |
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| ID | 8132913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2262208 |
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| End bp | 2264058 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865259 |
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| Product | protease 4 |
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| Protein accession | YP_003017547 |
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| Protein GI | 253688357 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.281538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAT TGTGGCGAAT TTTTAGTGGA TTTTTTAAGT GGACATGGCG TCTGCTTAAT
TTTATCAGAG AATTTATTCT CAATATTTTC CTTATCGCCC TGATTCTGGT TGGCGTTGGG
ATCTACTCAC AGGTAAAAAC AACGCCGGAA GCAGCCACGA AGGGTGCGCT GCTGGTCGAT
CTGACGGGTG TGGTCGTTGA TCAACCCACC GTCAATAACA AACTACGCCA ATTAGGGCGC
GAATTCTTCG GCGCATCGAA CAACCGTCGT CAGGAAAATT CACTGTTTGA TATCGTCGAC
AGTATTCGTC AGGCAAAAAG CGACGACAAC ATCACAGGAA TGGTGCTGGA TCTCAGCGAC
TTCACTGGTG CCGATCAACC GTCCTTACAA TATATTGGTA AGGCGCTGCG CGAATTCCGT
GATAGCGGTA AACCCATTTA TGCAGTCGGC GACAGCTACA ACCAGTCTCA ATATTATTTG
GCCAGTTTTG CCAATACGGT GTCATTGACG CCACAAGGTA GCGTCGATCT GCACGGTTTT
GCGACCAATA ATCTCTACTT CAAATCCATG CTCGACAAAC TGAAAGTGAC CACCAATATC
TTCCGTGTGG GCACCTATAA GTCAGCCGTT GAACCGTATC TGCGTGACGA TATGTCCCCT
GCGGCGCGCG ATGCCGATGG CCGTTGGATC AACGCGCTGT GGCAACAGTA TTTAAATACG
GTTTCCGCTA ACCGCCAGAT TACGCCTCAG CAGCTTTTCC CTGGTGCGGC GGGTATCATT
GCAGGCTTAC AGTCCGTTCA GGGCGATACC GCACGCTATG CGCTGGACAA CAAACTGGTT
GATGAAGTGG CATCACGTTC CATGACCGAG CAGTCGCTGG TTAAAGCGTT CGGTTGGAAT
AGTCAGAAAA ACAATTTTAA CTTCGTCAGC ATCTACGATT ACGTCGTCAA ACCGCCAGTG
CAAAACAATA ATCAGATCGC GGTTGTGTTT GCTAATGGTG CAATCATTGA CGGGCCGGAA
ACACCGGGAA TGGTCGGTGG CGATACCACC GCAGCGCAAA TTCGTGCCGC ACGCCTCGAT
CCTAAAGTCA AAGCACTGGT ACTGCGCGTC AATAGCCCCG GTGGTAGTGT CACAGCGTCG
GAGCTGATTC GCTCGGAACT GATGGCGCTC CGTCTGGCGG GCAAACCGAT CGTGGTATCT
ATGGGCGGTA TGGCAGCATC GGGTGGCTAC TGGATCTCAA CGCCAGCAAA CGCGATCATC
TCCAGCGCCA GTACGCTGAC AGGCTCTATC GGCATTTTTG GCGTGATTAC CACGTTCGAA
AACTCGCTGG AAAGCCTTGG CGTCCATACG GATGGCGTTG CCACCTCCCC ACTGGCCGAT
CTGTCGATTA CCAAATCCCT GCCGCCTGAA TTCTCGCAGA TGATGCAGTT GAGTATTGAA
CGCGGCTATA AGAACTTTAT CGATATCGTG GCACAGGCAC GTAAGAAAAC GCCGGAGCAA
ATCGATCAGA TCGCGCAAGG TCACGTTTGG GTCGGTAGCG ATGCGAAAGA AAATGGCCTG
GTCGATCAGA TCGGTGATTT TGATGACGCC GTGAAGAAAG CCGCTGAGTT GGCTAAACTA
GGACAATATC AATTGAACTG GTATGCCGAA CAGCCGGGCC TGCTCGACAC CATGCTGAAT
CAGGTGAACG CTTCCGTTTA CGCCCTACTG CCCGTTGCCG TTCAGTCTAT GTTGCCGGCA
CCGGTCGCAC AGCTGGCGGA GGCCGTGCGG GCACAGCCGT CTATCATGAA TAACCTGAAC
GACCCGCAGA ACCGGTACGC ATTTTGCCTT AACTGCGGAG AAGTCCGGTA G
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| Protein sequence | MRTLWRIFSG FFKWTWRLLN FIREFILNIF LIALILVGVG IYSQVKTTPE AATKGALLVD
LTGVVVDQPT VNNKLRQLGR EFFGASNNRR QENSLFDIVD SIRQAKSDDN ITGMVLDLSD
FTGADQPSLQ YIGKALREFR DSGKPIYAVG DSYNQSQYYL ASFANTVSLT PQGSVDLHGF
ATNNLYFKSM LDKLKVTTNI FRVGTYKSAV EPYLRDDMSP AARDADGRWI NALWQQYLNT
VSANRQITPQ QLFPGAAGII AGLQSVQGDT ARYALDNKLV DEVASRSMTE QSLVKAFGWN
SQKNNFNFVS IYDYVVKPPV QNNNQIAVVF ANGAIIDGPE TPGMVGGDTT AAQIRAARLD
PKVKALVLRV NSPGGSVTAS ELIRSELMAL RLAGKPIVVS MGGMAASGGY WISTPANAII
SSASTLTGSI GIFGVITTFE NSLESLGVHT DGVATSPLAD LSITKSLPPE FSQMMQLSIE
RGYKNFIDIV AQARKKTPEQ IDQIAQGHVW VGSDAKENGL VDQIGDFDDA VKKAAELAKL
GQYQLNWYAE QPGLLDTMLN QVNASVYALL PVAVQSMLPA PVAQLAEAVR AQPSIMNNLN
DPQNRYAFCL NCGEVR
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